GWAS1373901_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1373901_H (aging QTL GWAS1373901 (human)) Homo sapiens

Symbol: GWAS1373901_H
Name: aging QTL GWAS1373901 (human)
RGD ID: 597277827
Trait: aging
LOD Score: Not Available
P Value: 4.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381013,112,110 - 13,112,111RGD_MAPPER_PIPELINEGRCh38
GRCh371013,154,110 - 13,154,111RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1373901_HHumanaging  IAGPrs7895403405850206 GWAS_CATALOGPMID:35927272

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
736202OPTNoptineurin101310008213138308Human
38622886LOC10890314910p13 OPTN proximal Alu-mediated recombination region101311141613112247Human


Peak: (rs7895403)
Human AssemblyChrPosition (strand)Source
GRCh381013,112,110 - 13,112,111RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597277827GWAS1373901_Haging QTL GWAS1373901 (human)0.000004aging101311211013112111Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1373901_H GCST90132317 Healthy aging 1,489 Chinese ancestry cases, 5,721 Chinese ancestry controls G NR 0.000004 5.398 rs7895403 0.199 aging (EFO:0022597)
 PMID:35927272
Database
Acc Id
Source(s)
GWAS Catalog GCST90132317 GWAS Catalog

Note Type Note Reference