GWAS1372412_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1372412_H (X-24309 measurement QTL GWAS1372412 (human)) Homo sapiens

Symbol: GWAS1372412_H
Name: X-24309 measurement QTL GWAS1372412 (human)
RGD ID: 597276338
Trait: X-24309 measurement
LOD Score: Not Available
P Value: 3.0E-25
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh383132,535,169 - 132,535,170RGD_MAPPER_PIPELINEGRCh38
GRCh373132,254,013 - 132,254,014RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1372412_HHumanX-24309 measurement  IAGPrs115031146405850206 GWAS_CATALOGPMID:35347128

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1317589DNAJC13DnaJ heat shock protein family (Hsp40) member C133132417502132539032Human


Peak: (rs115031146)
Human AssemblyChrPosition (strand)Source
GRCh383132,535,169 - 132,535,170RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597276338GWAS1372412_HX-24309 measurement QTL GWAS1372412 (human)3e-25X-24309 measurement3132535169132535170Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1372412_H GCST90140584 X-24309 levels 6,136 Finnish ancestry individuals T NR 3E-25 24.523 rs115031146 1.11 X-24309 measurement (EFO:0800872)
 PMID:35347128
Database
Acc Id
Source(s)
GWAS Catalog GCST90140584 GWAS Catalog

Note Type Note Reference