GWAS1349299_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1349299_H (insomnia, total blood protein measurement QTL GWAS1349299 (human)) Homo sapiens

Symbol: GWAS1349299_H
Name: insomnia, total blood protein measurement QTL GWAS1349299 (human)
RGD ID: 597253225
Trait: insomnia, total blood protein measurement
Measurement Type: blood protein measurement   (CMO:0000028)    
LOD Score: Not Available
P Value: 2.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381236,422,478 - 236,422,479RGD_MAPPER_PIPELINEGRCh38
GRCh371236,585,778 - 236,585,779RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1349299_HHumanSleep Initiation and Maintenance Disorders  IAGPrs77896710405850206 GWAS_CATALOGPMID:34343768

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1349299_HHumanInsomnia  IAGPrs77896710405850206 GWAS_CATALOGPMID:34343768

Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1349299_HHumanblood protein measurement  IAGPrs77896710405850206 GWAS_CATALOGPMID:34343768

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1349299_HHumaninsomnia  IAGPrs77896710405850206 GWAS_CATALOGPMID:34343768
GWAS1349299_HHumantotal blood protein measurement  IAGPrs77896710405850206 GWAS_CATALOGPMID:34343768

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1351297EDARADDEDAR associated via death domain1236348259236484930Human


Peak: (rs77896710)
Human AssemblyChrPosition (strand)Source
GRCh381236,422,478 - 236,422,479RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597253225GWAS1349299_Hinsomnia, total blood protein measurement QTL GWAS1349299 (human)2e-08insomnia, total blood protein measurementblood protein measurement (CMO:0000028)1236422478236422479Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1349299_H GCST90026658 Total protein levels x insomnia interaction 93,452 cases with insomnia, 78,122 controls without insomnia ? NR 2E-8 7.699 rs77896710 N/A insomnia (EFO:0004698)
total blood protein measurement (EFO:0004536)
 PMID:34343768
Database
Acc Id
Source(s)
GWAS Catalog GCST90026658 GWAS Catalog

Note Type Note Reference