GWAS1325170_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1325170_H (protein measurement QTL GWAS1325170 (human)) Homo sapiens

Symbol: GWAS1325170_H
Name: protein measurement QTL GWAS1325170 (human)
RGD ID: 597229096
Trait: protein measurement
LOD Score: Not Available
P Value: 1.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381721,038,680 - 21,038,681RGD_MAPPER_PIPELINEGRCh38
GRCh371720,941,993 - 20,941,994RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1325170_HHumanprotein measurement  IAGPrs184647441405850206 GWAS_CATALOGPMID:32778093

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1321210USP22ubiquitin specific peptidase 22172099959621043419Human


Peak: (rs184647441)
Human AssemblyChrPosition (strand)Source
GRCh381721,038,680 - 21,038,681RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597229096GWAS1325170_Hprotein measurement QTL GWAS1325170 (human)1e-10protein measurement172103868021038681Human
1298406BP16_HBlood pressure QTL 16 (human)0.0004Blood pressurehypertension susceptibility171477864740778647Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1325170_H GCST011427 Protein quantitative trait loci (liver) 172 European ancestry individuals, 29 Black individuals, 86 individuals G 0.02091 1E-10 10 rs184647441 2.32 protein measurement (EFO:0004747)
 PMID:32778093
Database
Acc Id
Source(s)
GWAS Catalog GCST011427 GWAS Catalog

Note Type Note Reference