GWAS1295090_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1295090_H (lean body mass QTL GWAS1295090 (human)) Homo sapiens

Symbol: GWAS1295090_H
Name: lean body mass QTL GWAS1295090 (human)
RGD ID: 597199016
Trait: body lean mass   (VT:0010483)    
Measurement Type: total body lean mass   (CMO:0003950)    
LOD Score: Not Available
P Value: 5.0E-17
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3841,693,082 - 1,693,083RGD_MAPPER_PIPELINEGRCh38
GRCh3741,694,809 - 1,694,810RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1295090_HHumantotal body lean mass  IAGPrs8051405850206 GWAS_CATALOGPMID:38538606

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1295090_HHumanbody lean mass  IAGPrs8051405850206 GWAS_CATALOGPMID:38538606

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1295090_HHumanlean body mass  IAGPrs8051405850206 GWAS_CATALOGPMID:38538606

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1350910SLBPstem-loop histone mRNA binding protein416927311712319Human


Peak: (rs8051)
Human AssemblyChrPosition (strand)Source
GRCh3841,693,082 - 1,693,083RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597199016GWAS1295090_Hlean body mass QTL GWAS1295090 (human)5e-17body lean mass (VT:0010483)total body lean mass (CMO:0003950)416930821693083Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1295090_H GCST90428120 Whole body fat free mass (UKB data field 23101) 337,739 European ancestry individuals C NR 5E-17 16.302 rs8051 0.011705 lean body mass (EFO:0004995)
 PMID:38538606
Database
Acc Id
Source(s)
GWAS Catalog GCST90428120 GWAS Catalog

Note Type Note Reference