GWAS1265102_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1265102_H (eosinophil count QTL GWAS1265102 (human)) Homo sapiens

Symbol: GWAS1265102_H
Name: eosinophil count QTL GWAS1265102 (human)
RGD ID: 597169028
Trait: eosinophil quantity   (VT:0002602)    
Measurement Type: blood eosinophil count   (CMO:0000033)    
LOD Score: Not Available
P Value: 2.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381847,844,095 - 47,844,096RGD_MAPPER_PIPELINEGRCh38
GRCh371845,370,466 - 45,370,467RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1265102_HHumanblood eosinophil count  IAGPrs9304357405850206 GWAS_CATALOGPMID:34594039

Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1265102_HHumaneosinophil quantity  IAGPrs9304357405850206 GWAS_CATALOGPMID:34594039

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1265102_HHumaneosinophil count  IAGPrs9304357405850206 GWAS_CATALOGPMID:34594039

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1347299SMAD2SMAD family member 2184780895747930872Human


Peak: (rs9304357)
Human AssemblyChrPosition (strand)Source
GRCh381847,844,095 - 47,844,096RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597169028GWAS1265102_Heosinophil count QTL GWAS1265102 (human)2e-09eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)184784409547844096Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1265102_H GCST90018733 Eosinophil counts 93,063 East Asian ancestry individuals T 0.291026 2E-9 8.699 rs9304357 0.0291486 eosinophil count (EFO:0004842)
 PMID:34594039
Database
Acc Id
Source(s)
GWAS Catalog GCST90018733 GWAS Catalog

Note Type Note Reference