GWAS1223502_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1223502_H (complement factor H-related protein 2 measurement QTL GWAS1223502 (human)) Homo sapiens

Symbol: GWAS1223502_H
Name: complement factor H-related protein 2 measurement QTL GWAS1223502 (human)
RGD ID: 597127428
Trait: complement factor H-related protein 2 measurement
LOD Score: Not Available
P Value: 2.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381196,959,058 - 196,959,059RGD_MAPPER_PIPELINEGRCh38
GRCh371196,928,188 - 196,928,189RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1223502_HHumancomplement factor H-related protein 2 measurement  IAGPrs41310132405850206 GWAS_CATALOGPMID:34260947

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1606035CFHR2complement factor H related 21196943738196959622Human


Peak: (rs41310132)
Human AssemblyChrPosition (strand)Source
GRCh381196,959,058 - 196,959,059RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597127428GWAS1223502_Hcomplement factor H-related protein 2 measurement QTL GWAS1223502 (human)2e-10complement factor H-related protein 2 measurement1196959058196959059Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1223502_H GCST90019043 Complement factor H-related protein 2 levels 416 European ancestry individuals G 0.009 2E-10 9.699 rs41310132 1.833 complement factor H-related protein 2 measurement (EFO:0600055)
 PMID:34260947
Database
Acc Id
Source(s)
GWAS Catalog GCST90019043 GWAS Catalog

Note Type Note Reference