GWAS1179983_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1179983_H (body mass index QTL GWAS1179983 (human)) Homo sapiens

Symbol: GWAS1179983_H
Name: body mass index QTL GWAS1179983 (human)
RGD ID: 597083909
Trait: body mass index
Measurement Type: body mass index (BMI)   (CMO:0000105)    
LOD Score: Not Available
P Value: 3.0E-20
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381918,350,146 - 18,350,147RGD_MAPPER_PIPELINEGRCh38
GRCh371918,460,956 - 18,460,957RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1179983_HHumanbody mass index (BMI)  IAGPrs113230003405850206 GWAS_CATALOGPMID:31669095

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1179983_HHumanbody mass index  IAGPrs113230003405850206 GWAS_CATALOGPMID:31669095

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1348411PGPEP1pyroglutamyl-peptidase I191834059818369950Human


Peak: (rs113230003)
Human AssemblyChrPosition (strand)Source
GRCh381918,350,146 - 18,350,147RGD_MAPPER_PIPELINE


1 to 10 of 12 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597325338GWAS1421412_Hbody mass index QTL GWAS1421412 (human)2e-21body mass indexbody mass index (BMI) (CMO:0000105)191835014618350147Human
1300034BP50_HBlood pressure QTL 50 (human)2.10.00094Blood pressuresystolic191108946337089463Human
597073911GWAS1169985_Hcoronary artery disease QTL GWAS1169985 (human)0.000006coronary artery disease191835014618350147Human
597037703GWAS1133777_Hbody mass index QTL GWAS1133777 (human)4e-20body mass indexbody mass index (BMI) (CMO:0000105)191835014618350147Human
597309224GWAS1405298_Hbody mass index QTL GWAS1405298 (human)1e-18body mass indexbody mass index (BMI) (CMO:0000105)191835014618350147Human
597083909GWAS1179983_Hbody mass index QTL GWAS1179983 (human)3e-20body mass indexbody mass index (BMI) (CMO:0000105)191835014618350147Human
597226955GWAS1323029_Hsmoking status measurement QTL GWAS1323029 (human)1e-12smoking status measurement191835014618350147Human
596966624GWAS1086143_Hbody mass index QTL GWAS1086143 (human)1e-18body mass index191835014618350147Human
597349918GWAS1445992_Hbody mass index QTL GWAS1445992 (human)3e-11body mass indexbody mass index (BMI) (CMO:0000105)191835014618350147Human
597207613GWAS1303687_Hgrip strength measurement QTL GWAS1303687 (human)2e-11grip strength measurement191835014618350147Human

1 to 10 of 12 rows


1 to 12 of 12 rows
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1179983_H GCST009871 Body mass index 457,822 European ancestry individuals ? NR 3E-20 19.523 rs113230003 N/A body mass index (EFO:0004340)
 PMID:31669095
GWAS1133777_H GCST007039 Body mass index approximately 458,000 European ancestry individuals ? NR 4E-20 19.398 rs113230003 N/A body mass index (EFO:0004340)
 PMID:30595370
GWAS1144985_H GCST007072 Cardiovascular disease approximately 459,000 European ancestry individuals ? NR 2E-8 7.699 rs113230003 N/A cardiovascular disease (EFO:0000319)
 PMID:30595370
GWAS1169985_H GCST005194 Coronary artery disease 34,541 cases, 261,984 controls A 0.269 0.000006 5.222 rs113230003 0.033 coronary artery disease (EFO:0001645)
 PMID:29212778
GWAS1744958_H GCST010988 Adult body size 453,169 European ancestry individuals G 0.739445 1E-15 15 rs113230003 0.0126164 body height (OBA:VT0001253)
 PMID:32376654
GWAS1303687_H GCST005830 Hand grip strength 334,825 British ancestry individuals A 0.2596 2E-11 10.699 rs113230003 0.002 grip strength measurement (EFO:0006941)
 PMID:29691431
GWAS1321325_H GCST007474 Smoking initiation (ever regular vs never regular) up to 1,232,091 European ancestry individuals A 0.255 1E-10 10 rs113230003 0.018876148 smoking status measurement (EFO:0006527)
 PMID:30643251
GWAS1323029_H GCST007468 Smoking initiation (ever regular vs never regular) (MTAG) up to 1,359,002 European ancestry individuals A 0.255 1E-12 12 rs113230003 0.00902709 smoking status measurement (EFO:0006527)
 PMID:30643251
GWAS1405298_H GCST90435413 Body mass index 403,610 European ancestry individuals ? NR 1E-18 18 rs113230003 0.020813 body mass index (EFO:0004340)
 PMID:39134668
GWAS1421412_H GCST90301650 Body mass index 441,761 European ancestry individuals G NR 2E-21 20.699 rs113230003 0.0208493 body mass index (EFO:0004340)
 PMID:37280435
None Available GCST90429009 Current medication use (UKB data field 20003) 335,744 British ancestry individuals ? 0.743301 2E-8 7.699 rs113230003 0.040903 drug use measurement (EFO:0007010)
 PMID:38541061
GWAS1445992_H GCST90428119 Body mass index 342,566 European ancestry individuals A NR 3E-11 10.523 rs113230003 0.0184155 body mass index (EFO:0004340)
 PMID:38538606
1 to 12 of 12 rows
Database
Acc Id
Source(s)
GWAS Catalog GCST009871 GWAS Catalog

Note Type Note Reference