GWAS1171891_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1171891_H (BMI-adjusted waist-hip ratio QTL GWAS1171891 (human)) Homo sapiens

Symbol: GWAS1171891_H
Name: BMI-adjusted waist-hip ratio QTL GWAS1171891 (human)
RGD ID: 597075817
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 8.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38497,928,675 - 97,928,676RGD_MAPPER_PIPELINEGRCh38
GRCh37498,849,826 - 98,849,827RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1171891_HHumanbody size trait  IAGPrs1215050405850206 GWAS_CATALOGPMID:27195708

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1171891_HHumanBMI-adjusted waist-hip ratio  IAGPrs1215050405850206 GWAS_CATALOGPMID:27195708

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1602169STPG2sperm tail PG-rich repeat containing 249744124998143476Human


Peak: (rs1215050)
Human AssemblyChrPosition (strand)Source
GRCh38497,928,675 - 97,928,676RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597075817GWAS1171891_HBMI-adjusted waist-hip ratio QTL GWAS1171891 (human)0.000008body size trait (VT:0100005)49792867597928676Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1171891_H GCST003564 Waist-to-hip ratio adjusted for body mass index 10,318 South Asian ancestry individuals A 0.6 0.000008 5.097 rs1215050 0.05 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:27195708
Database
Acc Id
Source(s)
GWAS Catalog GCST003564 GWAS Catalog

Note Type Note Reference