GWAS1152303_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1152303_H (BMI-adjusted waist circumference QTL GWAS1152303 (human)) Homo sapiens

Symbol: GWAS1152303_H
Name: BMI-adjusted waist circumference QTL GWAS1152303 (human)
RGD ID: 597056229
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 3.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh387137,899,174 - 137,899,175RGD_MAPPER_PIPELINEGRCh38
GRCh377137,583,920 - 137,583,921RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152303_HHumanbody size trait  IAGPrs1677498405850206 GWAS_CATALOGPMID:31669095

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1152303_HHumanBMI-adjusted waist circumference  IAGPrs1677498405850206 GWAS_CATALOGPMID:31669095

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1314429CREB3L2cAMP responsive element binding protein 3 like 27137874979138002086Human


Peak: (rs1677498)
Human AssemblyChrPosition (strand)Source
GRCh387137,899,174 - 137,899,175RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597056229GWAS1152303_HBMI-adjusted waist circumference QTL GWAS1152303 (human)3e-08body size trait (VT:0100005)7137899174137899175Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1152303_H GCST009867 Waist circumference adjusted for body mass index 457,690 European ancestry individuals ? NR 3E-8 7.523 rs1677498 N/A BMI-adjusted waist circumference (EFO:0007789)
 PMID:31669095
Database
Acc Id
Source(s)
GWAS Catalog GCST009867 GWAS Catalog

Note Type Note Reference