GWAS1099915_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1099915_H (memory performance QTL GWAS1099915 (human)) Homo sapiens

Symbol: GWAS1099915_H
Name: memory performance QTL GWAS1099915 (human)
RGD ID: 596980396
Trait: memory performance
LOD Score: Not Available
P Value: 7.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38123,171,080 - 3,171,081RGD_MAPPER_PIPELINEGRCh38
GRCh37123,280,246 - 3,280,247RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1602896TSPAN9tetraspanin 91230773793286559Human


Peak: (rs11524965)
Human AssemblyChrPosition (strand)Source
GRCh38123,171,080 - 3,171,081RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
596980396GWAS1099915_Hmemory performance QTL GWAS1099915 (human)0.000007memory performance1231710803171081Human
597196418GWAS1292492_Hmemory performance QTL GWAS1292492 (human)0.000007memory performance1231710803171081Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1292492_H GCST90448422 Baseline memory in impaired cognition 373 African ancestry males ? NR 0.000007 5.155 rs11524965 0.338939 memory performance (EFO:0004874)
 PMID:37984853
Database
Acc Id
Source(s)
GWAS Catalog GCST90448422 GWAS Catalog

Note Type Note Reference