GWAS1095028_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1095028_H (body height QTL GWAS1095028 (human)) Homo sapiens

Symbol: GWAS1095028_H
Name: body height QTL GWAS1095028 (human)
RGD ID: 596975509
Trait: body height
LOD Score: Not Available
P Value: 7.0E-15
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38123,283,934 - 3,283,935RGD_MAPPER_PIPELINEGRCh38
GRCh37123,393,100 - 3,393,101RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1602896TSPAN9tetraspanin 91230773793286559Human


Peak: (rs67551338)
Human AssemblyChrPosition (strand)Source
GRCh38123,283,934 - 3,283,935RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
596975509GWAS1095028_Hbody height QTL GWAS1095028 (human)7e-15body height1232839343283935Human
597292297GWAS1388371_Hsize QTL GWAS1388371 (human)4e-14size1232839343283935Human
597235308GWAS1331382_Happendicular lean mass QTL GWAS1331382 (human)2e-55appendicular lean mass1232839343283935Human
596952330GWAS1071849_Hsize QTL GWAS1071849 (human)4e-14size1232839343283935Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1708405_H GCST004292 Glomerular filtration rate (creatinine) 110,517 European ancestry individuals T NR 2E-9 8.699 rs67551338 0.0124 serum creatinine amount (OBA:2050096)
glomerular filtration rate (OBA:0003747)
 PMID:28452372
GWAS1750252_H GCST90435412 Height 404,900 European ancestry individuals ? NR 7E-15 14.155 rs67551338 0.0282919 body height (OBA:VT0001253)
 PMID:39134668
GWAS1331382_H GCST90000025 Appendicular lean mass 450,243 European ancestry individuals T 0.0615 2E-55 54.699 rs67551338 0.0617 appendicular lean mass (EFO:0004980)
 PMID:33097823
GWAS1388371_H GCST90309355 Body size (confirmatory factor analysis Factor 21) 329,172 European ancestry individuals ? NR 4E-14 13.398 rs67551338 N/A size (EFO:0001695)
 PMID:38965376
Database
Acc Id
Source(s)
GWAS Catalog GCST90435412 GWAS Catalog

Note Type Note Reference