GWAS1037634_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1037634_H (self reported educational attainment QTL GWAS1037634 (human)) Homo sapiens

Symbol: GWAS1037634_H
Name: self reported educational attainment QTL GWAS1037634 (human)
RGD ID: 407388658
Trait: self reported educational attainment
LOD Score: Not Available
P Value: 4.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh385120,766,333 - 120,766,334RGD_MAPPER_PIPELINEGRCh38
GRCh375120,102,028 - 120,102,029RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1037634_HHumanself reported educational attainment  IAGPrs62379838405850206 GWAS_CATALOGPMID:27225129
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1602486PRR16proline rich 165120464278120794594Human

Position Markers

Peak: (rs62379838)
Human AssemblyChrPosition (strand)Source
GRCh385120,766,333 - 120,766,334RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407372140GWAS1021116_Hself reported educational attainment QTL GWAS1021116 (human)2e-15self reported educational attainment5120766333120766334Human
407388658GWAS1037634_Hself reported educational attainment QTL GWAS1037634 (human)4e-08self reported educational attainment5120766333120766334Human
407400134GWAS1049110_Hself reported educational attainment QTL GWAS1049110 (human)3e-16self reported educational attainment5120766333120766334Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1021116_H GCST006442 Educational attainment (years of education) up to 1,131,881 European ancestry individuals T 0.6953 2E-15 14.699 rs62379838 0.0121 self reported educational attainment (EFO:0004784)
 PMID:30038396
GWAS1037634_H GCST003676 Educational attainment (years of education) 405,072 European ancestry individuals T 0.6923 4E-8 7.398 rs62379838 0.013223585 self reported educational attainment (EFO:0004784)
 PMID:27225129
GWAS1049110_H GCST006571 Educational attainment (MTAG) 1,311,438 European ancestry individuals T 0.6953 3E-16 15.523 rs62379838 0.0116 self reported educational attainment (EFO:0004784)
 PMID:30038396
Database Acc Id Source(s)
GWAS Catalog GCST003676 GWAS Catalog

RGD Curation Notes
Note Type Note Reference