GWAS1034757_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1034757_H (obsolete_red blood cell distribution width QTL GWAS1034757 (human)) Homo sapiens

Symbol: GWAS1034757_H
Name: obsolete_red blood cell distribution width QTL GWAS1034757 (human)
RGD ID: 407385781
Trait: obsolete_red blood cell distribution width
Measurement Type: red blood cell distribution width- standard deviation   (CMO:0003232)    
red blood cell distribution width-coefficient of variation   (CMO:0000041)    
LOD Score: Not Available
P Value: 4.0E-12
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh383169,382,655 - 169,382,656RGD_MAPPER_PIPELINEGRCh38
GRCh373169,100,443 - 169,100,444RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1034757_HHumanred blood cell distribution width- standard deviation  IAGPrs223103405850206Based on the EFO term IDGWAS_CATALOGPMID:32888493
GWAS1034757_HHumanred blood cell distribution width-coefficient of variation  IAGPrs223103405850206Based on the EFO term IDGWAS_CATALOGPMID:32888493

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1034757_HHumanobsolete_red blood cell distribution width  IAGPrs223103405850206 GWAS_CATALOGPMID:32888493
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1322216MECOMMDS1 and EVI1 complex locus3169083507169663712Human

Position Markers

Peak: (rs223103)
Human AssemblyChrPosition (strand)Source
GRCh383169,382,655 - 169,382,656RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407289862GWAS938838_Hmean arterial pressure, unipolar depression QTL GWAS938838 (human)5e-13mean arterial pressure, unipolar depressionmean arterial blood pressure (CMO:0000009)3169382655169382656Human
407383876GWAS1032852_Hobsolete_red blood cell distribution width QTL GWAS1032852 (human)8e-10obsolete_red blood cell distribution widthred blood cell distribution width- standard deviation (CMO:0003232)3169382655169382656Human
407385781GWAS1034757_Hobsolete_red blood cell distribution width QTL GWAS1034757 (human)4e-12obsolete_red blood cell distribution widthred blood cell distribution width- standard deviation (CMO:0003232)3169382655169382656Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
Database Acc Id Source(s)
GWAS Catalog GCST90002369 GWAS Catalog

RGD Curation Notes
Note Type Note Reference