GWAS1008320_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1008320_H (BMI-adjusted hip circumference QTL GWAS1008320 (human)) Homo sapiens

Symbol: GWAS1008320_H
Name: BMI-adjusted hip circumference QTL GWAS1008320 (human)
RGD ID: 407359344
Trait: BMI-adjusted hip circumference
Measurement Type: hip circumference   (CMO:0000014)    
LOD Score: Not Available
P Value: 4.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38312,472,032 - 12,472,033RGD_MAPPER_PIPELINEGRCh38
GRCh37312,513,531 - 12,513,532RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1008320_HHumanhip circumference  IAGPrs77747822405850206Based on the EFO term IDGWAS_CATALOGPMID:34021172

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1008320_HHumanBMI-adjusted hip circumference  IAGPrs77747822405850206 GWAS_CATALOGPMID:34021172
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs77747822)
Human AssemblyChrPosition (strand)Source
GRCh38312,472,032 - 12,472,033RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407361255GWAS1010231_HBMI-adjusted hip circumference QTL GWAS1010231 (human)5e-14BMI-adjusted hip circumferencehip circumference (CMO:0000014)31247203212472033Human
407359344GWAS1008320_HBMI-adjusted hip circumference QTL GWAS1008320 (human)4e-11BMI-adjusted hip circumferencehip circumference (CMO:0000014)31247203212472033Human
2316345GLUCO224_HGlucose level QTL 224 (human)1.270.008Glucose level3121543441Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1008320_H GCST90020028 Hip circumference adjusted for BMI 219,872 British ancestry women A NR 4E-11 10.398 rs77747822 0.0346684 BMI-adjusted hip circumference (EFO:0008039)
 PMID:34021172
GWAS1010231_H GCST90020026 Hip index 219,872 British ancestry women A NR 5E-14 13.302 rs77747822 0.0412324 BMI-adjusted hip circumference (EFO:0008039)
 PMID:34021172
Database Acc Id Source(s)
GWAS Catalog GCST90020028 GWAS Catalog

RGD Curation Notes
Note Type Note Reference