GWAS1000785_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1000785_H (educational attainment QTL GWAS1000785 (human)) Homo sapiens

Symbol: GWAS1000785_H
Name: educational attainment QTL GWAS1000785 (human)
RGD ID: 407351809
Trait: educational attainment
LOD Score: Not Available
P Value: 5.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh385139,976,096 - 139,976,097RGD_MAPPER_PIPELINEGRCh38
GRCh375139,355,681 - 139,355,682RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1000785_HHumaneducational attainment  IAGPrs77301614405850206 GWAS_CATALOGPMID:35361970
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1606028NRG2neuregulin 25139846781140043299Human

Position Markers

Peak: (rs77301614)
Human AssemblyChrPosition (strand)Source
GRCh385139,976,096 - 139,976,097RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357314AASTH54_HAllergic/atopic asthma related QTL 54 (human)3.560.0003Reversible airflow obstructiontotal serum IgE5135892246150155845Human
407351809GWAS1000785_Heducational attainment QTL GWAS1000785 (human)5e-09educational attainment5139976096139976097Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1000785_H GCST90105038 Educational attainment 3,037,499 European ancestry individuals T 0.921 5E-9 8.302 rs77301614 0.0114185 educational attainment (EFO:0011015)
 PMID:35361970
Database Acc Id Source(s)
GWAS Catalog GCST90105038 GWAS Catalog

RGD Curation Notes
Note Type Note Reference