GWAS998726_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS998726_H (diffuse large B-cell lymphoma, event free survival time, response to immunochemotherapy QTL GWAS998726 (human)) Homo sapiens

Symbol: GWAS998726_H
Name: diffuse large B-cell lymphoma, event free survival time, response to immunochemotherapy QTL GWAS998726 (human)
RGD ID: 407349750
Trait: diffuse large B-cell lymphoma, event free survival time, response to immunochemotherapy
LOD Score: Not Available
P Value: 7.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh386113,750,518 - 113,750,519RGD_MAPPER_PIPELINEGRCh38
GRCh376114,071,720 - 114,071,721RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs7765004)
Human AssemblyChrPosition (strand)Source
GRCh386113,750,518 - 113,750,519RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407349750GWAS998726_Hdiffuse large B-cell lymphoma, event free survival time, response to immunochemotherapy QTL GWAS998726 (human)0.0000007diffuse large B-cell lymphoma, event free survival time, response to immunochemotherapy6113750518113750519Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS998726_H GCST003178 Event free survival in diffuse large B-cell lymphoma treated with immunochemotherapy 852 European ancestry cases C 0.33 7E-7 6.155 rs7765004 1.38 diffuse large B-cell lymphoma (EFO:0000403)
event free survival time (EFO:0000482)
response to immunochemotherapy (EFO:0007754)
 PMID:26460308
Database Acc Id Source(s)
GWAS Catalog GCST003178 GWAS Catalog

RGD Curation Notes
Note Type Note Reference