GWAS996417_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS996417_H (insomnia QTL GWAS996417 (human)) Homo sapiens

Symbol: GWAS996417_H
Name: insomnia QTL GWAS996417 (human)
RGD ID: 407347441
Trait: insomnia
LOD Score: Not Available
P Value: 3.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38320,553,217 - 20,553,218RGD_MAPPER_PIPELINEGRCh38
GRCh37320,594,709 - 20,594,710RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Insomnia  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs62242072)
Human AssemblyChrPosition (strand)Source
GRCh38320,553,217 - 20,553,218RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407347441GWAS996417_Hinsomnia QTL GWAS996417 (human)3e-08insomnia32055321720553218Human
2316345GLUCO224_HGlucose level QTL 224 (human)1.270.008Glucose level3121543441Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS996417_H GCST90131901 Insomnia 593,724 European ancestry cases, 1,771,286 European ancestry controls A NR 3E-8 7.523 rs62242072 0.005 insomnia (EFO:0004698)
 PMID:35835914
Database Acc Id Source(s)
GWAS Catalog GCST90131901 GWAS Catalog

RGD Curation Notes
Note Type Note Reference