GWAS993087_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS993087_H (BMI-adjusted waist-hip ratio QTL GWAS993087 (human)) Homo sapiens

Symbol: GWAS993087_H
Name: BMI-adjusted waist-hip ratio QTL GWAS993087 (human)
RGD ID: 407344111
Trait: BMI-adjusted waist-hip ratio
LOD Score: Not Available
P Value: 4.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38312,463,276 - 12,463,277RGD_MAPPER_PIPELINEGRCh38
GRCh37312,504,775 - 12,504,776RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS993087_HHumanBMI-adjusted waist-hip ratio  IAGPrs1699347405850206 GWAS_CATALOGPMID:34021172
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs1699347)
Human AssemblyChrPosition (strand)Source
GRCh38312,463,276 - 12,463,277RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407355412GWAS1004388_HBMI-adjusted waist circumference QTL GWAS1004388 (human)4e-08BMI-adjusted waist circumference31246327612463277Human
407344111GWAS993087_HBMI-adjusted waist-hip ratio QTL GWAS993087 (human)4e-11BMI-adjusted waist-hip ratio31246327612463277Human
2316345GLUCO224_HGlucose level QTL 224 (human)1.270.008Glucose level3121543441Human
407351181GWAS1000157_HBMI-adjusted waist-hip ratio QTL GWAS1000157 (human)1e-11BMI-adjusted waist-hip ratio31246327612463277Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS993087_H GCST90020025 Waist-to-hip ratio adjusted for BMI 219,872 British ancestry women G NR 4E-11 10.398 rs1699347 0.0285829 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
GWAS1000157_H GCST90020027 Waist-hip index 219,872 British ancestry women G NR 1E-11 11 rs1699347 0.0291804 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:34021172
GWAS1004388_H GCST90020029 Waist circumference adjusted for body mass index 219,872 British ancestry women G NR 4E-8 7.398 rs1699347 0.024008 BMI-adjusted waist circumference (EFO:0007789)
 PMID:34021172
Database Acc Id Source(s)
GWAS Catalog GCST90020025 GWAS Catalog

RGD Curation Notes
Note Type Note Reference