GWAS963669_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS963669_H (serum non-albumin protein measurement QTL GWAS963669 (human)) Homo sapiens

Symbol: GWAS963669_H
Name: serum non-albumin protein measurement QTL GWAS963669 (human)
RGD ID: 407314693
Trait: serum non-albumin protein measurement
Measurement Type: serum globulin level   (CMO:0002399)    
LOD Score: Not Available
P Value: 1.0E-32
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382230,105,497 - 30,105,498RGD_MAPPER_PIPELINEGRCh38
GRCh372230,501,486 - 30,501,487RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS963669_HHumanserum globulin level  IAGPrs9614144405850206Based on the EFO term IDGWAS_CATALOGPMID:33462484

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS963669_HHumanserum non-albumin protein measurement  IAGPrs9614144405850206 GWAS_CATALOGPMID:33462484
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1348799HORMAD2HORMA domain containing 2223007773230207456Human

Position Markers

Peak: (rs9614144)
Human AssemblyChrPosition (strand)Source
GRCh382230,105,497 - 30,105,498RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1581529BP71_HBlood pressure QTL 71 (human)20.001Blood pressurepulse pressure221109496637094966Human
407314693GWAS963669_Hserum non-albumin protein measurement QTL GWAS963669 (human)1e-32serum non-albumin protein measurementserum globulin level (CMO:0002399)223010549730105498Human
2289428BW313_HBody weight QTL 313 (human)2.090.0015Body weightBMI221134428437344284Human
407069310GWAS718286_Hblood protein measurement QTL GWAS718286 (human)4e-20blood protein measurementblood protein measurement (CMO:0000028)223010549730105498Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS718286_H GCST90019522 Serum total protein levels 313,032 European ancestry individuals, 5,573 African ancestry individuals, 6,687 South Asian ancestry individuals A NR 4E-20 19.398 rs9614144 0.0312 blood protein measurement (EFO:0007937)
 PMID:33462484
GWAS963669_H GCST90019515 Non-albumin protein levels 313,032 European ancestry individuals, 5,573 African ancestry individuals, 6,687 South Asian ancestry individuals A NR 1E-32 32 rs9614144 0.0403 serum non-albumin protein measurement (EFO:0004568)
 PMID:33462484
Database Acc Id Source(s)
GWAS Catalog GCST90019515 GWAS Catalog

RGD Curation Notes
Note Type Note Reference