GWAS914601_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS914601_H (1-stearyl-GPC (O-18:0) measurement QTL GWAS914601 (human)) Homo sapiens

Symbol: GWAS914601_H
Name: 1-stearyl-GPC (O-18:0) measurement QTL GWAS914601 (human)
RGD ID: 407265625
Trait: 1-stearyl-GPC (O-18:0) measurement
LOD Score: Not Available
P Value: 2.0E-20
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381161,813,163 - 61,813,164RGD_MAPPER_PIPELINEGRCh38
GRCh371161,580,635 - 61,580,636RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS914601_HHuman1-stearyl-GPC (O-18:0) measurement  IAGPrs174556405850206 GWAS_CATALOGPMID:36357675
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1344024FADS1fatty acid desaturase 1116179962761817003Human

Position Markers

Peak: (rs174556)
Human AssemblyChrPosition (strand)Source
GRCh381161,813,163 - 61,813,164RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407295823GWAS944799_Harachidonate 20:4n6 measurement QTL GWAS944799 (human)1e-09arachidonate 20:4n6 measurement116181316361813164Human
407295821GWAS944797_H1-stearoyl-2-arachidonoyl-GPC (18:0/20:4) measurement QTL GWAS944797 (human)5e-111-stearoyl-2-arachidonoyl-GPC (18:0/20:4) measurement116181316361813164Human
407297613GWAS946589_Hrheumatoid arthritis, hypothyroidism QTL GWAS946589 (human)3e-09phosphatidylcholine measurement116181316361813164Human
406955661GWAS604637_Hserum metabolite measurement QTL GWAS604637 (human)6e-22cholesteryl ester 20:2 measurement116181316361813164Human
407295819GWAS944795_H1-stearoyl-2-arachidonoyl-GPC (18:0/20:4) measurement QTL GWAS944795 (human)4e-201-stearoyl-2-arachidonoyl-GPC (18:0/20:4) measurement116181316361813164Human
1357380BW64_HBody weight QTL 64 (human)2.2Body weightpercent fat after exercise training116097893786978937Human
407295828GWAS944804_Hlevel of Phosphatidylcholine (14:0_18:2) in blood serum QTL GWAS944804 (human)8e-20level of Phosphatidylcholine (14:0_18:2) in blood serum116181316361813164Human
407296082GWAS945058_Hlevel of Phosphatidylinositol (16:0_18:2) in blood serum QTL GWAS945058 (human)3e-15level of Phosphatidylinositol (16:0_18:2) in blood serum116181316361813164Human
407296083GWAS945059_Hlevel of Phosphatidylethanolamine (18:0_18:2) in blood serum QTL GWAS945059 (human)2e-61level of Phosphatidylethanolamine (18:0_18:2) in blood serum116181316361813164Human
407295888GWAS944864_Hcholesteryl ester 20:2 measurement QTL GWAS944864 (human)3e-60cholesteryl ester 20:2 measurement116181316361813164Human
407296080GWAS945056_Hlevel of Phosphatidylethanolamine (O-18:2_20:4) in blood serum QTL GWAS945056 (human)4e-26level of Phosphatidylethanolamine (O-18:2_20:4) in blood serum116181316361813164Human
407298332GWAS947308_Hcholesteryl ester measurement QTL GWAS947308 (human)1e-15blood lipid amount (VT:0003949)116181316361813164Human
407294109GWAS943085_HBMI-adjusted fasting blood glucose measurement QTL GWAS943085 (human)8e-10BMI-adjusted fasting blood glucose measurement116181316361813164Human
407265625GWAS914601_H1-stearyl-GPC (O-18:0) measurement QTL GWAS914601 (human)2e-201-stearyl-GPC (O-18:0) measurement116181316361813164Human
407295526GWAS944502_Harachidonate 20:4n6 measurement QTL GWAS944502 (human)9e-09level of Phosphatidylinositol (16:0_18:1) in blood serum116181316361813164Human
407296422GWAS945398_Heicosapentaenoate EPA; 20:5n3 measurement QTL GWAS945398 (human)2e-22eicosapentaenoate EPA; 20:5n3 measurement116181316361813164Human
407298341GWAS947317_Hphosphatidylcholine measurement QTL GWAS947317 (human)2e-08phosphatidylcholine measurement116181316361813164Human
407124832GWAS773808_Hfatty acid measurement, fetal genotype effect measurement, breast milk measurement QTL GWAS773808 (human)5e-10fatty acid measurement, fetal genotype effect measurement, breast milk measurementmilk measurement (CMO:0000787)116181316361813164Human
407296738GWAS945714_Hphosphatidylinositol measurement QTL GWAS945714 (human)9e-15phosphatidylinositol measurement116181316361813164Human
407296418GWAS945394_Hmetabolite measurement QTL GWAS945394 (human)6e-09metabolite measurement116181316361813164Human
407124834GWAS773810_Hfatty acid measurement, breast milk measurement, parental genotype effect measurement QTL GWAS773810 (human)2e-10fatty acid measurement, breast milk measurement, parental genotype effect measurementmilk measurement (CMO:0000787)116181316361813164Human
407296736GWAS945712_Hphosphatidylinositol measurement QTL GWAS945712 (human)0.0000009phosphatidylinositol measurement116181316361813164Human
407295200GWAS944176_Hprotein measurement QTL GWAS944176 (human)6e-12protein measurement116181316361813164Human
407298337GWAS947313_HBMI-adjusted fasting blood glucose measurement QTL GWAS947313 (human)0.0000006BMI-adjusted fasting blood glucose measurement116181316361813164Human
407297964GWAS946940_Hphosphatidylcholine measurement QTL GWAS946940 (human)1e-17phosphatidylcholine measurement116181316361813164Human
407297004GWAS945980_Hphosphatidylcholine measurement QTL GWAS945980 (human)1e-68phosphatidylcholine measurement116181316361813164Human
407297003GWAS945979_Hphosphatidylcholine measurement QTL GWAS945979 (human)2e-73phosphatidylcholine measurement116181316361813164Human
407297010GWAS945986_Hphosphatidylcholine measurement QTL GWAS945986 (human)2e-39phosphatidylcholine measurement116181316361813164Human
407296370GWAS945346_Hlevel of Sphingomyelin (d38:2) in blood serum QTL GWAS945346 (human)6e-17level of Sphingomyelin (d38:2) in blood serum116181316361813164Human
406960565GWAS609541_Hgranulocyte percentage of myeloid white cells QTL GWAS609541 (human)2e-17blood lipid amount (VT:0003949)blood phospholipid level (CMO:0001169)116181316361813164Human
406987190GWAS636166_Hcis/trans-18:2 fatty acid measurement, trans fatty acid measurement QTL GWAS636166 (human)3e-14cis/trans-18:2 fatty acid measurement, trans fatty acid measurementmilk trans fatty acid measurement (CMO:0000824)116181316361813164Human
407295283GWAS944259_Hphosphatidylcholine measurement QTL GWAS944259 (human)2e-97phosphatidylcholine measurement116181316361813164Human
407262963GWAS911939_Hphosphatidylcholine measurement QTL GWAS911939 (human)3e-17blood lipid amount (VT:0003949)blood triglyceride level (CMO:0000118)116181316361813164Human
407295294GWAS944270_Hphosphatidylcholine measurement QTL GWAS944270 (human)1e-108phosphatidylcholine measurement116181316361813164Human
407295231GWAS944207_Htriacylglycerol 54:3 measurement QTL GWAS944207 (human)2e-12blood triglyceride amount (VT:0002644)116181316361813164Human
407001208GWAS650184_Htriacylglycerol 58:10 measurement QTL GWAS650184 (human)3e-16blood triglyceride amount (VT:0002644)116181316361813164Human
407295803GWAS944779_Hphosphatidylcholine measurement QTL GWAS944779 (human)2e-11phosphatidylcholine measurement116181316361813164Human
407297272GWAS946248_Hphosphatidylcholine measurement QTL GWAS946248 (human)4e-66phosphatidylcholine measurement116181316361813164Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS604637_H GCST012020 Serum metabolite levels 3,926 Hispanic/Latino individuals C 0.555018 6E-22 21.222 rs174556 0.237 serum metabolite measurement (EFO:0005653)
 PMID:33031748
GWAS609541_H GCST004608 Granulocyte percentage of myeloid white cells 169,545 European ancestry individuals T 0.3082 2E-17 16.699 rs174556 0.03290644 granulocyte percentage of myeloid white cells (EFO:0007997)
 PMID:27863252
GWAS636166_H GCST002721 Trans fatty acid levels 8,013 European ancestry individuals T 0.294 3E-14 13.523 rs174556 0.0033 cis/trans-18:2 fatty acid measurement (EFO:0006824)
trans fatty acid measurement (EFO:0006821)
 PMID:25646338
GWAS650184_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 3E-16 15.523 rs174556 0.29782426 triacylglycerol 58:10 measurement (EFO:0010437)
 PMID:23823483
GWAS773808_H GCST005587 Breast milk fatty acid composition (infant genotype effect) 1,142 Bangladeshi ancestry infants T 0.17 5E-10 9.302 rs174556 N/A fatty acid measurement (EFO:0005110)
fetal genotype effect measurement (EFO:0007959)
breast milk measurement (EFO:0009092)
 PMID:29514873
GWAS773810_H GCST005586 Breast milk fatty acid composition (maternal genotype effect) 1,142 Bangladeshi ancestry (non-array genotyped, whole-genome imputed) mothers T 0.17 2E-10 9.699 rs174556 0.85 fatty acid measurement (EFO:0005110)
breast milk measurement (EFO:0009092)
parental genotype effect measurement (EFO:0005939)
 PMID:29514873
None Available GCST90060738 Phosphatidylcholine(35:4)_[M+H]1+/Phosphatidylethanolamine(38:4)_[M+H]1+/Phosphatidate(40:5)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0635 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
GWAS911939_H GCST90060692 Phosphatidylcholine(33:3)_[M+H]1+/Phosphatidylethanolamine(36:3)_[M+H]1+/Phosphatidate(38:4)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0477 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060718 Phosphatidylcholine(34:2)_[M+H]1+/Phosphatidylethanolamine(37:2)_[M+H]1+/Phosphatidate(39:3)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.1273 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
GWAS914601_H GCST90244978 1-stearyl-GPC (O-18:0) levels 14,296 European ancestry individuals T 0.3007 2E-20 19.699 rs174556 0.10471607 1-stearyl-GPC (O-18:0) measurement (EFO:0800460)
 PMID:36357675
None Available GCST90060959 Phosphatidylcholine(40:5)_[M+OAc]1-/Phosphatidylserine(44:4)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0688 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060759 Phosphatidylglycerol(36:0)_[M-H]1- levels 5,662 Pakistani ancestry individuals A NR 3E-17 16.523 rs174556 0.0477 glycerophospholipid measurement (EFO:0007630)
 PMID:34503513
None Available GCST90060946 Phosphatidylinositol(38:4)_[M-H]1- levels 5,662 Pakistani ancestry individuals A NR 3E-17 16.523 rs174556 0.0635 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060793 Phosphatidate(43:4)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0693 phosphatidate measurement (EFO:0020047)
 PMID:34503513
None Available GCST90060699 Phosphatidate(39:1)_[M+H]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.1247 phosphatidate measurement (EFO:0020047)
 PMID:34503513
None Available GCST90060864 Phosphatidylserine(35:2)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals T NR 3E-17 16.523 rs174556 0.0571 phosphatidylserines measurement (EFO:0020049)
 PMID:34503513
None Available GCST90060989 Phosphatidylserine(42:5)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0713 phosphatidylserines measurement (EFO:0020049)
 PMID:34503513
None Available GCST90060875 Phosphatidylcholine(40:5)_[M+H]1+ levels 5,662 Pakistani ancestry individuals C NR 2E-17 16.699 rs174556 0.1094 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060805 Phosphatidylcholine(37:4)_[M+H]1+/Phosphatidylethanolamine(40:3)_[M+H]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0846 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060878 Phosphatidylcholine(36:5)_[M+OAc]1-/Phosphatidylserine(40:4)_[M-H]1- levels 5,662 Pakistani ancestry individuals T NR 2E-17 16.699 rs174556 0.2138 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060903 Phosphatidylinositol(36:4)_[M-H]1- levels 5,662 Pakistani ancestry individuals T NR 3E-17 16.523 rs174556 0.1837 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060985 Phosphatidylserine(42:7)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals A NR 3E-17 16.523 rs174556 0.0391 phosphatidylserines measurement (EFO:0020049)
 PMID:34503513
None Available GCST90061008 Phosphatidylserine(44:6)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals C NR 2E-17 16.699 rs174556 0.0688 phosphatidylserines measurement (EFO:0020049)
 PMID:34503513
None Available GCST90060707 Phosphatidylglycerol(34:0)_[M-H]1- levels 5,662 Pakistani ancestry individuals T NR 3E-17 16.523 rs174556 0.0792 glycerophospholipid measurement (EFO:0007630)
 PMID:34503513
None Available GCST90060638 Phosphatidate(34:2)_[M-H]1- levels 5,662 Pakistani ancestry individuals A NR 3E-17 16.523 rs174556 0.1155 phosphatidate measurement (EFO:0020047)
 PMID:34503513
None Available GCST90060988 Phosphatidylinositol(36:1)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0731 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060987 Triacylglycerol(56:7)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.1836 triglyceride measurement (EFO:0004530)
 PMID:34503513
None Available GCST90061006 Triacylglycerol(58:9)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0778 triglyceride measurement (EFO:0004530)
 PMID:34503513
None Available GCST90060634 Cholesteryl ester(18:3)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.038 cholesteryl ester 18:3 measurement (EFO:0010346)
 PMID:34503513
None Available GCST90060733 Phosphatidylethanolamine(38:5)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0693 phosphatidylethanolamine measurement (EFO:0010228)
 PMID:34503513
None Available GCST90060796 Phosphatidylcholine-O(38:5)_[M+H]1+/Phosphatidylcholine-P(38:4)_[M+H]1+ levels 5,662 Pakistani ancestry individuals T NR 2E-17 16.699 rs174556 0.0639 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060646 Cholesteryl ester(20:5)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals A NR 2E-17 16.699 rs174556 0.1834 cholesteryl ester 20:5 measurement (EFO:0010349)
 PMID:34503513
None Available GCST90060580 Fatty acid(20:4)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0702 fatty acid measurement (EFO:0005110)
 PMID:34503513
None Available GCST90060912 Phosphatidylinositol(36:2)_[M-H]1- levels 5,662 Pakistani ancestry individuals T NR 3E-17 16.523 rs174556 0.0553 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060584 Fatty acid(22:5)_[M-H]1- levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0873 fatty acid measurement (EFO:0005110)
 PMID:34503513
None Available GCST90060585 Fatty acid(22:4)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0591 fatty acid measurement (EFO:0005110)
 PMID:34503513
None Available GCST90060735 Phosphatidylcholine-O(36:5)_[M+H]1+/Phosphatidylcholine-P(36:4)_[M+H]1+ levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0695 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060822 Phosphatidylcholine(38:5)_[M+H]1+/Phosphatidylethanolamine(41:5)_[M+H]1+/Phosphatidate(43:6)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0746 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060922 Phosphatidylcholine(38:4)_[M+OAc]1-/Phosphatidylserine(42:3)_[M-H]1- levels 5,662 Pakistani ancestry individuals A NR 2E-17 16.699 rs174556 0.0574 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060992 Phosphatidylinositol(36:0)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0426 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060867 Phosphatidylinositol(34:2)_[M-H]1- levels 5,662 Pakistani ancestry individuals T NR 3E-17 16.523 rs174556 0.0631 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060859 Sphingomyelin(44:9)_[M+H]1- levels 5,662 Pakistani ancestry individuals A NR 2E-17 16.699 rs174556 0.0587 sphingomyelin measurement (EFO:0010118)
 PMID:34503513
None Available GCST90060799 Phosphatidylcholine(37:4)_[M+H]1+/Phosphatidylethanolamine(40:4)_[M+H]1+/Phosphatidate(42:5)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals C NR 2E-17 16.699 rs174556 0.1264 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060851 Phosphatidylcholine-O(40:6)_[M+H]1+/Phosphatidylcholine-P(40:5)_[M+H]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.1837 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060990 Phosphatidylcholine(42:4)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0734 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060602 Lysophosphatidylcholine(20:4)_[M+H]1+ levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0553 lysophosphatidylcholine measurement (EFO:0010224)
 PMID:34503513
None Available GCST90060855 Phosphatidylcholine-O(40:5)_[M+H]1+/Phosphatidylcholine-P(40:4)_[M+H]1+ levels 5,662 Pakistani ancestry individuals A NR 3E-17 16.523 rs174556 0.0449 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060665 Phosphatidylethanolamine(34:2)_[M+H]1+ levels 5,662 Pakistani ancestry individuals T NR 3E-17 16.523 rs174556 0.0542 phosphatidylethanolamine measurement (EFO:0010228)
 PMID:34503513
None Available GCST90060898 Phosphatidylinositol-O(36:0)_[M-H]1-/Phosphatidylglycerol(37:0)_[M+OAc]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0483 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060825 Phosphatidylinositol-O(33:0)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0884 phosphatidylinositol measurement (EFO:0010230)
 PMID:34503513
None Available GCST90060957 Phosphatidylcholine(40:6)_[M+OAc]1-/Phosphatidylserine(44:5)_[M-H]1- levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.1837 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060870 Phosphatidylcholine(40:6)_[M+H]1+/Phosphatidylethanolamine(43:6)_[M+H]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0733 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060772 Phosphatidylcholine(36:2)_[M+H]1+/Phosphatidylethanolamine(39:2)_[M+H]1+/Phosphatidate(41:3)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0477 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060766 Phosphatidylcholine(36:3)_[M+H]1+/Phosphatidylethanolamine(39:3)_[M+H]1+/Phosphatidate(41:4)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals T NR 2E-17 16.699 rs174556 0.0722 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060709 Phosphatidylethanolamine-O(38:6)_[M+H]1+/Phosphatidylcholine-P(35:5)_[M+H]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0879 phosphatidylethanolamine measurement (EFO:0010228)
 PMID:34503513
None Available GCST90060997 Triacylglycerol(56:4)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0477 triglyceride measurement (EFO:0004530)
 PMID:34503513
None Available GCST90060991 Triacylglycerol(56:6)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0818 triglyceride measurement (EFO:0004530)
 PMID:34503513
None Available GCST90060696 Phosphatidylcholine(33:2)_[M+H]1+/Phosphatidylethanolamine(36:2)_[M+H]1+/Phosphatidate(38:3)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.184 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060686 Phosphatidylcholine(32:0)_[M+H]1+/Phosphatidylethanolamine(35:0)_[M+H]1+/Phosphatidate(37:1)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0585 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060649 Cholesteryl ester(20:4)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals T NR 2E-17 16.699 rs174556 0.0369 cholesteryl ester 20:4 measurement (EFO:0010348)
 PMID:34503513
None Available GCST90060818 Phosphatidylcholine(38:6)_[M+H]1+/Phosphatidylethanolamine(41:6)_[M+H]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0535 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060962 Phosphatidylcholine(40:4)_[M+OAc]1-/Phosphatidylserine(44:3)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 3E-17 16.523 rs174556 0.0484 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060939 Phosphatidylcholine(39:6)_[M+OAc]1-/Phosphatidylserine(43:5)_[M-H]1- levels 5,662 Pakistani ancestry individuals A NR 3E-17 16.523 rs174556 0.0856 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060711 Phosphatidylethanolamine-O(38:4)_[M-H]1-/Phosphatidylcholine-O(35:4)_[M-H]1-/Phosphatidylcholine-P(35:3)_[M-H]1- levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0478 phosphatidylethanolamine measurement (EFO:0010228)
 PMID:34503513
None Available GCST90060882 Phosphatidylcholine(36:3)_[M+OAc]1-/Phosphatidylserine(40:2)_[M-H]1- levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.188 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060744 Phosphatidylcholine-O(36:3)_M+H]1+/Phosphatidylcholine-P(36:2)_M+H]1+ levels 5,662 Pakistani ancestry individuals G NR 2E-17 16.699 rs174556 0.0687 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060833 Phosphatidylcholine(38:3)_[M+H]1+/Phosphatidylethanolamine(41:3)_[M+H]1+/Phosphatidate(43:4)_[M+NH4]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0734 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060926 Phosphatidylcholine(38:3)_[M+OAc]1-/Phosphatidylserine(42:2)_[M-H]1- levels 5,662 Pakistani ancestry individuals A NR 3E-17 16.523 rs174556 0.1851 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060829 Phosphatidylcholine(38:4)_[M+H]1+/Phosphatidylethanolamine(41:4)_[M+H]1+ levels 5,662 Pakistani ancestry individuals A NR 2E-17 16.699 rs174556 0.0811 phosphatidylcholine measurement (EFO:0010226)
 PMID:34503513
None Available GCST90060745 Phosphatidate(41:2)_[M+H]1+ levels 5,662 Pakistani ancestry individuals C NR 3E-17 16.523 rs174556 0.0887 phosphatidate measurement (EFO:0020047)
 PMID:34503513
GWAS943085_H GCST90094959 Fasting glucose adjusted for BMI 52,211 European ancestry, African American or Afro-Caribbean, Hispanic or Latin American, Asian ancestry, Other ancestry, Native American ancestry individuals T 0.329 8E-10 9.097 rs174556 0.0463 BMI-adjusted fasting blood glucose measurement (EFO:0008036)
 PMID:34951656
GWAS944176_H GCST90248900 Prenylcysteine oxidase 1 levels 10,708 European ancestry individuals T 0.3 6E-12 11.222 rs174556 0.102 protein measurement (EFO:0004747)
 PMID:34648354
GWAS944207_H GCST90244536 Triacylglycerol (54:3) levels 4,642 European ancestry women T NR 2E-12 11.699 rs174556 0.1598 triacylglycerol 54:3 measurement (EFO:0010421)
 PMID:36193934
GWAS944259_H GCST90024301 Alkylphosphatidylcholine (O-16:0/20:3) levels 4,492 European ancestry individuals T NR 2E-97 96.699 rs174556 0.48 phosphatidylcholine measurement (EFO:0010226)
 PMID:35668104
GWAS944270_H GCST90024271 Phosphatidylcholine (18:1_20:3) levels 4,492 European ancestry individuals T NR 1E-108 108 rs174556 0.513 phosphatidylcholine measurement (EFO:0010226)
 PMID:35668104
GWAS944502_H GCST90271645 Arachidonate (20:4n6) levels (advanced age) 116 Han Chinese ancestry individuals ? NR 9E-9 8.046 rs174556 0.1406 arachidonate 20:4n6 measurement (EFO:0021063)
 PMID:37118062
GWAS944779_H GCST90128909 Phosphatidylcholine diacyl C38:5 levels 79 monozygotic twin pairs, 215 dizygotic twin pairs, 413 individuals ? NR 2E-11 10.699 rs174556 0.05152793 phosphatidylcholine measurement (EFO:0010226)
 PMID:27073872
GWAS944795_H GCST90271660 1-stearoyl-2-arachidonoyl-gpc (18:0/20:4) levels (elderly offspring) 232 Han Chinese ancestry individuals ? NR 4E-20 19.398 rs174556 0.1073 1-stearoyl-2-arachidonoyl-GPC (18:0/20:4) measurement (EFO:0800271)
 PMID:37118062
GWAS944797_H GCST90271643 1-stearoyl-2-arachidonoyl-gpc (18:0/20:4) levels (advanced age) 116 Han Chinese ancestry individuals ? NR 5E-11 10.302 rs174556 0.1146 1-stearoyl-2-arachidonoyl-GPC (18:0/20:4) measurement (EFO:0800271)
 PMID:37118062
GWAS944799_H GCST90271662 Arachidonate (20:4n6) levels (elderly offspring) 232 Han Chinese ancestry individuals ? NR 1E-9 9 rs174556 0.0986 arachidonate 20:4n6 measurement (EFO:0021063)
 PMID:37118062
GWAS944804_H GCST90244406 Phosphatidylcholine (14:0_18:2) levels 4,642 European ancestry women T NR 8E-20 19.097 rs174556 0.2101 PMID:36193934
GWAS944864_H GCST90024008 Cholesteryl ester (20:2) levels 4,492 European ancestry individuals T NR 3E-60 59.523 rs174556 0.383 cholesteryl ester 20:2 measurement (EFO:0021440)
 PMID:35668104
GWAS945056_H GCST90277357 Phosphatidylethanolamine (O-18:2_20:4) levels 7,154 Finnish ancestry individuals T 0.3796 4E-26 25.398 rs174556 0.182631 PMID:37907536
None Available GCST90277358 Phosphatidylinositol (16:0_18:1) levels 7,157 Finnish ancestry individuals T 0.3796 9E-9 8.046 rs174556 0.0997193 PMID:37907536
GWAS945058_H GCST90244491 Phosphatidylinositol (16:0_18:2) levels 4,642 European ancestry women T NR 3E-15 14.523 rs174556 0.1811 PMID:36193934
GWAS945059_H GCST90244479 Phosphatidylethanolamine (18:0_18:2) levels 4,642 European ancestry women T NR 2E-61 60.699 rs174556 0.3712 PMID:36193934
GWAS945346_H GCST90277375 Sphingomyelin (d38:2) levels 7,150 Finnish ancestry individuals T 0.3796 6E-17 16.222 rs174556 0.144338 PMID:37907536
GWAS945394_H GCST90245672 X-21365 levels 14,296 European ancestry individuals T 0.3006 6E-9 8.222 rs174556 0.06479132 metabolite measurement (EFO:0004725)
 PMID:36357675
GWAS945398_H GCST90243512 Eicosapentaenoate EPA; 20:5n3 levels 7,816 European ancestry individuals T 0.3 2E-22 21.699 rs174556 0.036 eicosapentaenoate EPA (EFO:0021049)
 PMID:24816252
GWAS945712_H GCST90024222 Lysophosphatidylinositol (18:0) [sn1] levels 4,492 European ancestry individuals T NR 9E-7 6.046 rs174556 0.117 phosphatidylinositol measurement (EFO:0010230)
 PMID:35668104
GWAS945714_H GCST90024226 Lysophosphatidylinositol (18:2) [sn1] levels 4,492 European ancestry individuals T NR 9E-15 14.046 rs174556 0.184 phosphatidylinositol measurement (EFO:0010230)
 PMID:35668104
GWAS945979_H GCST90024248 Phosphatidylcholine (16:0_20:3) (a) levels 4,492 European ancestry individuals T NR 2E-73 72.699 rs174556 0.424 phosphatidylcholine measurement (EFO:0010226)
 PMID:35668104
GWAS945980_H GCST90025540 Alkylphosphatidylcholine (O-16:0/20:3) levels 4,492 European ancestry individuals T NR 1E-68 68 rs174556 0.407 phosphatidylcholine measurement (EFO:0010226)
 PMID:35668104
GWAS945986_H GCST90025487 Phosphatidylcholine (16:0_20:3) (a) levels 4,492 European ancestry individuals T NR 2E-39 38.699 rs174556 0.311 phosphatidylcholine measurement (EFO:0010226)
 PMID:35668104
GWAS946248_H GCST90025510 Phosphatidylcholine (18:1_20:3) levels 4,492 European ancestry individuals T NR 4E-66 65.398 rs174556 0.403 phosphatidylcholine measurement (EFO:0010226)
 PMID:35668104
None Available GCST90025247 Cholesteryl ester (20:2) levels 4,492 European ancestry individuals T NR 6E-22 21.222 rs174556 0.229 cholesteryl ester 20:2 measurement (EFO:0021440)
 PMID:35668104
GWAS946589_H GCST90428109 Hypothyroidism or rheumatoid arthritis (pleiotropy) 22,350 European ancestry rheumatoid arthritis cases, 51,194 European ancestry hypothyroidism cases, 518,206 European ancestry controls ? NR 3E-9 8.523 rs174556 N/A rheumatoid arthritis (EFO:0000685)
hypothyroidism (EFO:0004705)
 PMID:38368726
GWAS946940_H GCST90102046 Phosphatidylcholines (35:4) levels 650 Amish individuals T 0.309311211 1E-17 17 rs174556 0.4973937 phosphatidylcholine measurement (EFO:0010226)
 PMID:35393526
None Available GCST90102064 Phosphatidylcholines (37:5) levels 650 Amish individuals T 0.309311211 3E-9 8.523 rs174556 0.3392051 phosphatidylcholine measurement (EFO:0010226)
 PMID:35393526
GWAS947308_H GCST90024072 Dehydrocholesteryl ester (18:2) levels 4,492 European ancestry individuals T NR 1E-15 15 rs174556 0.188 cholesteryl ester measurement (EFO:0010351)
 PMID:35668104
GWAS947313_H GCST90094960 Fasting glucose adjusted for BMI 19,745 European ancestry individuals T 0.2949 6E-7 6.222 rs174556 0.0565 BMI-adjusted fasting blood glucose measurement (EFO:0008036)
 PMID:34951656
GWAS947317_H GCST90024594 Total Phosphatidylcholine levels 4,492 European ancestry individuals T NR 2E-8 7.699 rs174556 0.133 phosphatidylcholine measurement (EFO:0010226)
 PMID:35668104
Database Acc Id Source(s)
GWAS Catalog GCST90244978 GWAS Catalog

RGD Curation Notes
Note Type Note Reference