GWAS883241_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS883241_H (blood protein measurement QTL GWAS883241 (human)) Homo sapiens

Symbol: GWAS883241_H
Name: blood protein measurement QTL GWAS883241 (human)
RGD ID: 407234265
Trait: blood protein measurement
Measurement Type: blood protein measurement   (CMO:0000028)    
LOD Score: Not Available
P Value: 3.0E-19
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38317,094,105 - 17,094,106RGD_MAPPER_PIPELINEGRCh38
GRCh37317,135,597 - 17,135,598RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS883241_HHumanblood protein measurement  IAGPrs6765957405850206Based on the EFO term IDGWAS_CATALOGPMID:38412862

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS883241_HHumanblood protein measurement  IAGPrs6765957405850206 GWAS_CATALOGPMID:38412862
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs6765957)
Human AssemblyChrPosition (strand)Source
GRCh38317,094,105 - 17,094,106RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2316345GLUCO224_HGlucose level QTL 224 (human)1.270.008Glucose level3121543441Human
407234265GWAS883241_Hblood protein measurement QTL GWAS883241 (human)3e-19blood protein measurementblood protein measurement (CMO:0000028)31709410517094106Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS883241_H GCST90314374 DAG1/F2R protein level ratio 43,509 European ancestry individuals ? NR 3E-19 18.523 rs6765957 0.0612495 blood protein measurement (EFO:0007937)
 PMID:38412862
Database Acc Id Source(s)
GWAS Catalog GCST90314374 GWAS Catalog

RGD Curation Notes
Note Type Note Reference