GWAS836149_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS836149_H (urinary uromodulin measurement QTL GWAS836149 (human)) Homo sapiens

Symbol: GWAS836149_H
Name: urinary uromodulin measurement QTL GWAS836149 (human)
RGD ID: 407187173
Trait: urinary uromodulin measurement
LOD Score: Not Available
P Value: 9.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh386170,627,834 - 170,627,835RGD_MAPPER_PIPELINEGRCh38
GRCh376170,936,922 - 170,936,923RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS836149_HHumanurinary uromodulin measurement  IAGPrs2808344405850206 GWAS_CATALOGPMID:35228297
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
38620926LOC101929692uncharacterized LOC1019296926170612666170728496Human

Position Markers

Peak: (rs2808344)
Human AssemblyChrPosition (strand)Source
GRCh386170,627,834 - 170,627,835RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407187173GWAS836149_Hurinary uromodulin measurement QTL GWAS836149 (human)0.0000009urinary uromodulin measurement6170627834170627835Human
1643404BMD3_HBone mineral density QTL 3 (human)2.420.0005Bone mineral density6157563614170805979Human
1643367BW323_HBody weight QTL 323 (human)2.420.0005Body fat amount6157563614170805979Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS836149_H GCST90103502 Urinary uromodulin levels (raw) 29,315 European ancestry individuals A 0.015 9E-7 6.046 rs2808344 0.7581 urinary uromodulin measurement (EFO:0005663)
 PMID:35228297
Database Acc Id Source(s)
GWAS Catalog GCST90103502 GWAS Catalog

RGD Curation Notes
Note Type Note Reference