GWAS808526_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS808526_H (forced expiratory volume, response to bronchodilator QTL GWAS808526 (human)) Homo sapiens

Symbol: GWAS808526_H
Name: forced expiratory volume, response to bronchodilator QTL GWAS808526 (human)
RGD ID: 407159550
Trait: forced expiratory volume, response to bronchodilator
Measurement Type: forced expiratory volume   (CMO:0000254)    
LOD Score: Not Available
P Value: 2.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381162,579,038 - 62,579,039RGD_MAPPER_PIPELINEGRCh38
GRCh371162,346,510 - 62,346,511RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS808526_HHumanforced expiratory volume  IAGPrs116766958405850206Based on the EFO term IDGWAS_CATALOGPMID:26634245

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS808526_HHumanforced expiratory volume  IAGPrs116766958405850206 GWAS_CATALOGPMID:26634245
GWAS808526_HHumanresponse to bronchodilator  IAGPrs116766958405850206 GWAS_CATALOGPMID:26634245
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1345565TUT1terminal uridylyl transferase 1, U6 snRNA-specific116257505262591523Human

Position Markers

Peak: (rs116766958)
Human AssemblyChrPosition (strand)Source
GRCh381162,579,038 - 62,579,039RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357380BW64_HBody weight QTL 64 (human)2.2Body weightpercent fat after exercise training116097893786978937Human
407159550GWAS808526_Hforced expiratory volume, response to bronchodilator QTL GWAS808526 (human)0.000002forced expiratory volume, response to bronchodilatorforced expiratory volume (CMO:0000254)116257903862579039Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS808526_H GCST003262 Post bronchodilator FEV1 10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals T 0.978 0.000002 5.699 rs116766958 0.266 forced expiratory volume (EFO:0004314)
response to bronchodilator (GO:0097366)
 PMID:26634245
Database Acc Id Source(s)
GWAS Catalog GCST003262 GWAS Catalog

RGD Curation Notes
Note Type Note Reference