GWAS794447_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS794447_H (total lipids in very large VLDL measurement QTL GWAS794447 (human)) Homo sapiens

Symbol: GWAS794447_H
Name: total lipids in very large VLDL measurement QTL GWAS794447 (human)
RGD ID: 407145471
Trait: total lipids in very large VLDL measurement
Measurement Type: blood very low density lipoprotein cholesterol level   (CMO:0000648)    
LOD Score: Not Available
P Value: 3.0E-80
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381944,913,221 - 44,913,222RGD_MAPPER_PIPELINEGRCh38
GRCh371945,416,478 - 45,416,479RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS794447_HHumanblood very low density lipoprotein cholesterol level  IAGPrs584007405850206Based on the EFO term IDGWAS_CATALOGPMID:38448586

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS794447_HHumantotal lipids in very large VLDL measurement  IAGPrs584007405850206 GWAS_CATALOGPMID:38448586
GWAS794447_HHumanvery low density lipoprotein cholesterol measurement  IAGPrs584007405850206 GWAS_CATALOGPMID:38448586
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
155765829LOC127891702H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:45415901-45416660194491264444913403Human

Position Markers

Peak: (rs584007)
Human AssemblyChrPosition (strand)Source
GRCh381944,913,221 - 44,913,222RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407292166GWAS941142_HHbA1c measurement QTL GWAS941142 (human)1e-17HbA1c measurementblood hemoglobin A1c level (CMO:0002786)194491322144913222Human
407078274GWAS727250_Hfree cholesterol in large VLDL measurement QTL GWAS727250 (human)4e-81free cholesterol in large VLDL measurement 194491322144913222Human
407056775GWAS705751_Hchylomicron measurement, very low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS705751 (human)5e-83chylomicron measurement, very low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)194491322144913222Human
407068934GWAS717910_Hchylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS717910 (human)5e-81chylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
407052165GWAS701141_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS701141 (human)2e-82triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
407197698GWAS846674_Htriglyceride measurement QTL GWAS846674 (human)7e-11triglyceride measurementblood triglyceride level (CMO:0000118)194491322144913222Human
407059018GWAS707994_Hdiglyceride measurement QTL GWAS707994 (human)5e-29diglyceride measurement194491322144913222Human
407121805GWAS770781_Htriglyceride measurement QTL GWAS770781 (human)1e-83triglyceride measurementblood triglyceride level (CMO:0000118)194491322144913222Human
407049097GWAS698073_Htriglycerides in small VLDL measurement QTL GWAS698073 (human)4e-77free cholesterol in very large VLDL measurement blood very low density lipoprotein triglyceride level (CMO:0002688)194491322144913222Human
407165070GWAS814046_Halkaline phosphatase measurement QTL GWAS814046 (human)6e-54alkaline phosphatase measurementblood alkaline phosphatase activity level (CMO:0000576)194491322144913222Human
407092303GWAS741279_Hvery low density lipoprotein cholesterol measurement QTL GWAS741279 (human)9e-81very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
407053965GWAS702941_Hfree cholesterol measurement, chylomicron measurement, very low density lipoprotein cholesterol measurement QTL GWAS702941 (human)5e-75free cholesterol measurement, chylomicron measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
407142474GWAS791450_Hphospholipids in VLDL measurement QTL GWAS791450 (human)6e-80phospholipids in VLDL measurement 194491322144913222Human
407127764GWAS776740_Hfree cholesterol in medium VLDL measurement QTL GWAS776740 (human)1e-80free cholesterol in medium VLDL measurement 194491322144913222Human
1559110SCL22_HSerum cholesterol level QTL 22 (human)3.590.000241Lipid levelLDL cholesterol193190759457907594Human
407197972GWAS846948_Htriglyceride measurement QTL GWAS846948 (human)4e-10triglyceride measurementblood triglyceride level (CMO:0000118)194491322144913222Human
407310165GWAS959141_HC-reactive protein measurement QTL GWAS959141 (human)4e-290C-reactive protein measurementblood C-reactive protein level (CMO:0003160)194491322144913222Human
407088599GWAS737575_Htotal cholesterol in large VLDL QTL GWAS737575 (human)2e-84total cholesterol in large VLDL194491322144913222Human
407066710GWAS715686_Hchylomicron measurement, very low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS715686 (human)5e-84chylomicron measurement, very low density lipoprotein cholesterol measurement, phospholipid measurementblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
407089814GWAS738790_Hphospholipids in VLDL measurement QTL GWAS738790 (human)7e-83phospholipids in VLDL measurement 194491322144913222Human
407124051GWAS773027_Hsexual dimorphism measurement QTL GWAS773027 (human)1e-18sexual dimorphism measurement194491322144913222Human
407239698GWAS888674_Hsphingomyelin measurement QTL GWAS888674 (human)1e-10sphingomyelin measurement194491322144913222Human
407061147GWAS710123_Htriglyceride measurement, diglyceride measurement QTL GWAS710123 (human)2e-11triglyceride measurement, diglyceride measurementblood triglyceride level (CMO:0000118)194491322144913222Human
407268446GWAS917422_Hsphingomyelin measurement QTL GWAS917422 (human)7e-13sphingomyelin measurement194491322144913222Human
407309535GWAS958511_Hlow density lipoprotein cholesterol measurement QTL GWAS958511 (human)2e-38low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)194491322144913222Human
407266846GWAS915822_Hsphingomyelin measurement QTL GWAS915822 (human)3e-11sphingomyelin measurement194491322144913222Human
407338910GWAS987886_Htriglyceride measurement QTL GWAS987886 (human)7e-193triglyceride measurementblood triglyceride level (CMO:0000118)194491322144913222Human
407124888GWAS773864_Htriglycerides in medium VLDL measurement QTL GWAS773864 (human)5e-74triglycerides in medium VLDL measurementblood very low density lipoprotein triglyceride level (CMO:0002688)194491322144913222Human
1331657COPD9_HChronic obstructive pulmonary disease QTL 9 (human)1.94Chronic airflow obstructionpost-bronchodilator FEV1193102176057021760Human
407125913GWAS774889_Hvery low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS774889 (human)1e-35very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
407140966GWAS789942_Htotal cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS789942 (human)1e-79very low density lipoprotein cholesterol measurement, esterified cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
406895652GWAS544628_H1-palmitoyl-2-oleoyl-GPE (16:0/18:1) measurement QTL GWAS544628 (human)1e-131-palmitoyl-2-oleoyl-GPE (16:0/18:1) measurement194491322144913222Human
407186913GWAS835889_Haspartate aminotransferase measurement QTL GWAS835889 (human)1e-14aspartate aminotransferase measurementblood aspartate aminotransferase activity level (CMO:0000580)194491322144913222Human
407268450GWAS917426_Hsphingomyelin measurement QTL GWAS917426 (human)2e-10sphingomyelin measurement194491322144913222Human
407145635GWAS794611_Htriglycerides in very large VLDL measurement QTL GWAS794611 (human)2e-79triglycerides in very large VLDL measurement 194491322144913222Human
407248618GWAS897594_Hapolipoprotein A 1 measurement QTL GWAS897594 (human)3e-26apolipoprotein A 1 measurementblood apolipoprotein AI level (CMO:0000520)194491322144913222Human
407034924GWAS683900_Htriglycerides in small LDL measurement QTL GWAS683900 (human)1e-54triglycerides in small LDL measurement 194491322144913222Human
407153781GWAS802757_Hsleep duration, triglyceride measurement QTL GWAS802757 (human)1e-19sleep duration, triglyceride measurementblood triglyceride level (CMO:0000118)194491322144913222Human
407266423GWAS915399_Hsphingomyelin measurement QTL GWAS915399 (human)7e-12sphingomyelin measurement194491322144913222Human
407092599GWAS741575_Htotal lipids in large VLDL QTL GWAS741575 (human)3e-81total lipids in large VLDL194491322144913222Human
407300403GWAS949379_HAlzheimer disease QTL GWAS949379 (human)3e-14Alzheimer disease194491322144913222Human
407300400GWAS949376_HAlzheimer disease QTL GWAS949376 (human)2e-09Alzheimer disease194491322144913222Human
407267902GWAS916878_Hapolipoprotein B measurement QTL GWAS916878 (human)2e-25apolipoprotein B measurementblood apoliprotein B level (CMO:0000522)194491322144913222Human
407145471GWAS794447_Htotal lipids in very large VLDL measurement QTL GWAS794447 (human)3e-80very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)194491322144913222Human
407088632GWAS737608_Htriglycerides in large VLDL measurement QTL GWAS737608 (human)4e-78triglycerides in large VLDL measurementblood very low density lipoprotein triglyceride level (CMO:0002688)194491322144913222Human
407283581GWAS932557_Htotal cholesterol measurement QTL GWAS932557 (human)2e-64total cholesterol measurementblood total cholesterol level (CMO:0000051)194491322144913222Human
407188345GWAS837321_HC-reactive protein measurement QTL GWAS837321 (human)4e-258C-reactive protein measurementblood C-reactive protein level (CMO:0003160)194491322144913222Human
407079806GWAS728782_Hcholesterol esters in large VLDL measurement QTL GWAS728782 (human)3e-84cholesterol esters in large VLDL measurement194491322144913222Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS544628_H GCST90244948 1-palmitoyl-2-oleoyl-GPE (16:0/18:1) levels 14,296 European ancestry individuals A 0.3587 1E-13 13 rs584007 0.0792581 1-palmitoyl-2-oleoyl-GPE (16:0/18:1) measurement (EFO:0800608)
 PMID:36357675
GWAS683900_H GCST90269647 Triglycerides in small LDL (UKB data field 23550) 88,329 European ancestry individuals A 0.358065 1E-54 54 rs584007 0.0748714 triglycerides in small LDL measurement (EFO:0022323)
 PMID:36764567
GWAS698073_H GCST90302114 Triglycerides in small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 4E-77 76.398 rs584007 0.0778 triglycerides in small VLDL measurement (EFO:0022145)
 PMID:38448586
GWAS701141_H GCST90302125 Triglyceride levels in VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 2E-82 81.699 rs584007 0.0806 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS702941_H GCST90302166 Free cholesterol levels in chylomicrons and extremely large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 5E-75 74.302 rs584007 0.0767 free cholesterol measurement (EFO:0008591)
chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS705751_H GCST90302168 Total lipid levels in chylomicrons and extremely large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 5E-83 82.302 rs584007 0.0808 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:38448586
GWAS707994_H GCST90301953 Diacylglycerol levels 74,743 Non-Finnish European ancestry individuals A 0.3553 5E-29 28.302 rs584007 0.0659 diglyceride measurement (EFO:0010223)
 PMID:38448586
GWAS710123_H GCST90301954 Ratio of diacylglycerol to triglycerides 74,743 Non-Finnish European ancestry individuals A 0.3553 2E-11 10.699 rs584007 0.0397 triglyceride measurement (EFO:0004530)
diglyceride measurement (EFO:0010223)
 PMID:38448586
GWAS715686_H GCST90302170 Phospholipid levels in chylomicrons and extremely large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 5E-84 83.302 rs584007 0.0813 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:38448586
GWAS717910_H GCST90302162 Total cholesterol levels in chylomicrons and extremely large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 5E-81 80.302 rs584007 0.0798 chylomicron measurement (EFO:0008596)
total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS727250_H GCST90302023 Free cholesterol in large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 4E-81 80.398 rs584007 0.0799 free cholesterol in large VLDL measurement (EFO:0022265)
 PMID:38448586
GWAS728782_H GCST90302021 Cholesterol esters in large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 3E-84 83.523 rs584007 0.0815 cholesterol esters in large VLDL measurement (EFO:0022170)
 PMID:38448586
GWAS737575_H GCST90302019 Total Cholesterol in large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 2E-84 83.699 rs584007 0.0816 total cholesterol in large VLDL (EFO:0022177)
 PMID:38448586
GWAS737608_H GCST90302029 Triglycerides in large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 4E-78 77.398 rs584007 0.0784 triglycerides in large VLDL measurement (EFO:0022178)
 PMID:38448586
GWAS738790_H GCST90302027 Phospholipids in large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 7E-83 82.155 rs584007 0.0809 phospholipids in VLDL measurement (EFO:0022301)
 PMID:38448586
GWAS741279_H GCST90302026 Concentration of large VLDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 9E-81 80.046 rs584007 0.0798 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS741575_H GCST90302025 Total lipids in large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 3E-81 80.523 rs584007 0.08 total lipids in large VLDL (EFO:0022175)
 PMID:38448586
GWAS770781_H GCST90302076 Serum total triglyceride levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 1E-83 83 rs584007 0.0812 triglyceride measurement (EFO:0004530)
 PMID:38448586
GWAS773027_H GCST90270118 Multi-trait sex score 141,980 European ancestry males ? NR 1E-18 18 rs584007 N/A sexual dimorphism measurement (EFO:0021796)
 PMID:37277458
GWAS773864_H GCST90302067 Triglycerides in medium VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 5E-74 73.302 rs584007 0.0763 triglycerides in medium VLDL measurement (EFO:0022155)
 PMID:38448586
GWAS774889_H GCST90302062 Free cholesterol to total lipids ratio in medium VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3647 1E-35 35 rs584007 0.0514 very low density lipoprotein cholesterol measurement (EFO:0008317)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:38448586
GWAS776740_H GCST90302061 Free cholesterol in medium VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3657 1E-80 80 rs584007 0.0796 free cholesterol in medium VLDL measurement (EFO:0022269)
 PMID:38448586
GWAS789942_H GCST90302138 Total cholesterol in very large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 1E-79 79 rs584007 0.0791 total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
None Available GCST90302140 Cholesterol esters in very large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 1E-79 79 rs584007 0.0791 very low density lipoprotein cholesterol measurement (EFO:0008317)
esterified cholesterol measurement (EFO:0008589)
 PMID:38448586
GWAS791450_H GCST90302146 Phospholipids in very large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 6E-80 79.222 rs584007 0.0793 phospholipids in VLDL measurement (EFO:0022301)
 PMID:38448586
None Available GCST90302142 Free cholesterol in very large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 4E-77 76.398 rs584007 0.0778 free cholesterol in very large VLDL measurement (EFO:0022274)
 PMID:38448586
GWAS794447_H GCST90302144 Total lipids in very large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 3E-80 79.523 rs584007 0.0795 total lipids in very large VLDL measurement (EFO:0022313)
 PMID:38448586
GWAS794611_H GCST90302148 Triglycerides in very large VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 2E-79 78.699 rs584007 0.079 triglycerides in very large VLDL measurement (EFO:0022325)
 PMID:38448586
None Available GCST90302145 Concentration of very large VLDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.3658 3E-80 79.523 rs584007 0.0795 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS802757_H GCST009364 Triglyceride levels x long total sleep time interaction (2df test) at least 2,926 African American long sleepers, 364 Chinese ancestry long sleepers, 112 Asian ancestry long sleepers, at least 7,664 European ancestry long sleepers, 1,038 Hispanic/Latino long sleepers, up to 11,906 African American controls, 1,449 Chinese ancestry controls, 454 Asian ancestry controls, at least 31,986 European ancestry controls, 4,091 Hispanic/Latino controls ? NR 1E-19 19 rs584007 0.02548 sleep duration (EFO:0005271)
triglyceride measurement (EFO:0004530)
 PMID:31719535
GWAS814046_H GCST90019494 Serum alkaline phosphatase levels 342,535 European ancestry individuals, 6,019 African ancestry individuals, 7,337 South Asian ancestry individuals G NR 6E-54 53.222 rs584007 0.0407 alkaline phosphatase measurement (EFO:0004533)
 PMID:33462484
GWAS835889_H GCST90019497 Aspartate aminotransferase levels 341,246 European ancestry individuals, 5,982 African ancestry individuals, 7,313 South Asian ancestry individuals G NR 1E-14 14 rs584007 0.0203 aspartate aminotransferase measurement (EFO:0004736)
 PMID:33462484
GWAS837321_H GCST90019499 C-reactive protein levels 341,805 European ancestry individuals, 6,006 African ancestry individuals, 7,316 South Asian ancestry individuals G NR 4E-258 257.398 rs584007 0.0901 C-reactive protein measurement (EFO:0004458)
 PMID:33462484
GWAS846674_H GCST90060356 Triacylglycerol_46:5_[M+NH4]1+ levels 13,814 British ancestry individuals A NR 7E-11 10.155 rs584007 0.0929385 triglyceride measurement (EFO:0004530)
 PMID:34503513
GWAS846948_H GCST90060362 Triacylglycerol_46:4_[M+NH4]1+ levels 13,814 British ancestry individuals A NR 4E-10 9.398 rs584007 0.0953477 triglyceride measurement (EFO:0004530)
 PMID:34503513
GWAS888674_H GCST90060269 Sphingomyelin_36:0_[M+H]1+ levels 13,814 British ancestry individuals A NR 1E-10 10 rs584007 0.0763333 sphingomyelin measurement (EFO:0010118)
 PMID:34503513
GWAS897594_H GCST90019495 Apolipoprotein A1 levels 311,601 European ancestry individuals, 5,550 African ancestry individuals, 6,682 South Asian ancestry individuals G NR 3E-26 25.523 rs584007 0.0292 apolipoprotein A 1 measurement (EFO:0004614)
 PMID:33462484
GWAS915399_H GCST90060306 Sphingomyelin_38:1_[M+H]1+ levels 13,814 British ancestry individuals A NR 7E-12 11.155 rs584007 0.082914 sphingomyelin measurement (EFO:0010118)
 PMID:34503513
GWAS915822_H GCST90060266 Sphingomyelin_36:1_[M+H]1+ levels 13,814 British ancestry individuals A NR 3E-11 10.523 rs584007 0.0812079 sphingomyelin measurement (EFO:0010118)
 PMID:34503513
GWAS916878_H GCST90019496 Apolipoprotein B levels 340,860 European ancestry individuals, 5,962 African ancestry individuals, 7,275 South Asian ancestry individuals G NR 2E-25 24.699 rs584007 0.0275 apolipoprotein B measurement (EFO:0004615)
 PMID:33462484
None Available GCST90060352 Sphingomyelin_40:2_[M+H]1+ levels 13,814 British ancestry individuals A NR 1E-10 10 rs584007 0.0919262 sphingomyelin measurement (EFO:0010118)
 PMID:34503513
GWAS917422_H GCST90060403 Sphingomyelin_42:2_[M+H]1+ levels 13,814 British ancestry individuals A NR 7E-13 12.155 rs584007 0.106583 sphingomyelin measurement (EFO:0010118)
 PMID:34503513
GWAS917426_H GCST90060507 Sphingomyelin_42:2_[M+OAc]1- levels 13,814 British ancestry individuals A NR 2E-10 9.699 rs584007 0.0580251 sphingomyelin measurement (EFO:0010118)
 PMID:34503513
GWAS932557_H GCST90019501 Total cholesterol levels 342,508 European ancestry individuals, 6,014 African ancestry individuals, 7,336 South Asian ancestry individuals G NR 2E-64 63.699 rs584007 0.0445 total cholesterol measurement (EFO:0004574)
 PMID:33462484
GWAS941142_H GCST90019509 Glycated hemoglobin levels 327,177 European ancestry individuals, 4,847 African ancestry individuals, 6,895 South Asian ancestry individuals G NR 1E-17 17 rs584007 0.023 HbA1c measurement (EFO:0004541)
 PMID:33462484
GWAS949376_H GCST007600 Alzheimer's disease 952 European ancestry male cases, 1,789 European ancestry female cases, 6,337 European ancestry male controls, 8,402 European ancestry female controls ? NR 2E-9 8.699 rs584007 1.5096664 PMID:30636644
GWAS949379_H GCST007600 Alzheimer's disease 952 European ancestry male cases, 1,789 European ancestry female cases, 6,337 European ancestry male controls, 8,402 European ancestry female controls ? NR 3E-14 13.523 rs584007 1.4945852 PMID:30636644
GWAS958511_H GCST90019512 Low density lipoprotein cholesterol levels 341,875 European ancestry individuals, 6,003 African ancestry individuals, 7,319 South Asian ancestry individuals G NR 2E-38 37.699 rs584007 0.0341 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:33462484
GWAS959141_H GCST90179146 C-reactive protein levels (MTAG) 575,531 European ancestry individuals A NR 4E-290 289.398 rs584007 0.076439 C-reactive protein measurement (EFO:0004458)
 PMID:36376304
GWAS987886_H GCST90019523 Triglyceride levels 342,233 European ancestry individuals, 6,014 African ancestry individuals, 7,330 South Asian ancestry individuals G NR 7E-193 192.155 rs584007 0.0777 triglyceride measurement (EFO:0004530)
 PMID:33462484
None Available GCST90448418 Baseline memory 11,062 European ancestry males, 880 African ancestry males ? NR 9E-12 11.046 rs584007 0.069017 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448451 Memory decline 11,062 European ancestry males ? NR 6E-9 8.222 rs584007 0.006779 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448424 Baseline memory 11,062 European ancestry males ? NR 7E-12 11.155 rs584007 0.070687 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448434 Baseline memory in impaired cognition 3,987 European ancestry females ? NR 4E-12 11.398 rs584007 0.150444 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448454 Memory decline 13,154 European ancestry females, 2,487 African ancestry females ? NR 1E-16 16 rs584007 0.008953 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448427 Baseline memory 13,154 European ancestry females, 2,487 African ancestry females ? NR 8E-22 21.097 rs584007 0.093882 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448445 Memory decline 11,062 European ancestry males, 880 African ancestry males ? NR 1E-9 9 rs584007 0.006947 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448425 Baseline memory in impaired cognition 4,478 European ancestry males ? NR 5E-10 9.302 rs584007 0.109285 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448433 Baseline memory 13,154 European ancestry females ? NR 5E-20 19.302 rs584007 0.093278 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448452 Memory decline in impaired cognition 4,478 European ancestry males ? NR 9E-8 7.046 rs584007 0.013667 memory performance (EFO:0004874)
 PMID:37984853
None Available GCST90448460 Memory decline 13,154 European ancestry females ? NR 1E-15 15 rs584007 0.008983 memory performance (EFO:0004874)
 PMID:37984853
Database Acc Id Source(s)
GWAS Catalog GCST90302144 GWAS Catalog
  GCST90302145 GWAS Catalog

RGD Curation Notes
Note Type Note Reference