GWAS772813_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS772813_H (coronary artery disease QTL GWAS772813 (human)) Homo sapiens

Symbol: GWAS772813_H
Name: coronary artery disease QTL GWAS772813 (human)
RGD ID: 407123837
Trait: coronary artery disease
LOD Score: Not Available
P Value: 5.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh383151,501,353 - 151,501,354RGD_MAPPER_PIPELINEGRCh38
GRCh373151,219,141 - 151,219,142RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1352652IGSF10immunoglobulin superfamily member 103151432432151619925Human

Position Markers

Peak: (rs9840578)
Human AssemblyChrPosition (strand)Source
GRCh383151,501,353 - 151,501,354RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300026BP36_HBlood pressure QTL 36 (human)4.04Blood pressurehypertension susceptibility3135720453161720453Human
407123837GWAS772813_Hcoronary artery disease QTL GWAS772813 (human)0.000005coronary artery disease3151501353151501354Human
1298415BP24_HBlood pressure QTL 24 (human)2.9Blood pressurehypertension susceptibility3135720453161720453Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS772813_H GCST90132303 Coronary artery disease 12,117 Hispanic or Latin American cases, 44,853 Hispanic or Latin American controls ? NR 0.000005 5.302 rs9840578 0.0974 coronary artery disease (EFO:0001645)
 PMID:35915156
Database Acc Id Source(s)
GWAS Catalog GCST90132303 GWAS Catalog

RGD Curation Notes
Note Type Note Reference