GWAS744750_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS744750_H (N-acetylglucosaminylasparagine measurement QTL GWAS744750 (human)) Homo sapiens

Symbol: GWAS744750_H
Name: N-acetylglucosaminylasparagine measurement QTL GWAS744750 (human)
RGD ID: 407095774
Trait: N-acetylglucosaminylasparagine measurement
LOD Score: Not Available
P Value: 8.0E-29
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh386167,276,756 - 167,276,757RGD_MAPPER_PIPELINEGRCh38
GRCh376167,690,244 - 167,690,245RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS744750_HHumanN-acetylglucosaminylasparagine measurement  IAGPrs73257132405850206 GWAS_CATALOGPMID:37253714
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1343732UNC93Aunc-93 homolog A6167269032167316014Human

Position Markers

Peak: (rs73257132)
Human AssemblyChrPosition (strand)Source
GRCh386167,276,756 - 167,276,757RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1643404BMD3_HBone mineral density QTL 3 (human)2.420.0005Bone mineral density6157563614170805979Human
407095774GWAS744750_HN-acetylglucosaminylasparagine measurement QTL GWAS744750 (human)8e-29N-acetylglucosaminylasparagine measurement6167276756167276757Human
1643367BW323_HBody weight QTL 323 (human)2.420.0005Body fat amount6157563614170805979Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS744750_H GCST90300392 Metabolite levels (N-acetylglucosaminylasparagine) 5,713 European, Hispanic or African American individuals A 0.0433 8E-29 28.097 rs73257132 0.504 N-acetylglucosaminylasparagine measurement (EFO:0800151)
 PMID:37253714
Database Acc Id Source(s)
GWAS Catalog GCST90300392 GWAS Catalog

RGD Curation Notes
Note Type Note Reference