GWAS743411_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS743411_H (X-14626 measurement QTL GWAS743411 (human)) Homo sapiens

Symbol: GWAS743411_H
Name: X-14626 measurement QTL GWAS743411 (human)
RGD ID: 407094435
Trait: X-14626 measurement
LOD Score: Not Available
P Value: 4.0E-13
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381730,284,376 - 30,284,377RGD_MAPPER_PIPELINEGRCh38
GRCh371728,611,394 - 28,611,395RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS743411_HHumanX-14626 measurement  IAGPrs7214014405850206 GWAS_CATALOGPMID:36357675
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1312244BLMHbleomycin hydrolase173024820330291944Human

Position Markers

Peak: (rs7214014)
Human AssemblyChrPosition (strand)Source
GRCh381730,284,376 - 30,284,377RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407094435GWAS743411_HX-14626 measurement QTL GWAS743411 (human)4e-13X-14626 measurement173028437630284377Human
1298406BP16_HBlood pressure QTL 16 (human)0.0004Blood pressurehypertension susceptibility171477864740778647Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS743411_H GCST90245592 X-14626 levels 14,296 European ancestry individuals A 0.4412 4E-13 12.398 rs7214014 0.081844345 X-14626 measurement (EFO:0021374)
 PMID:36357675
Database Acc Id Source(s)
GWAS Catalog GCST90245592 GWAS Catalog

RGD Curation Notes
Note Type Note Reference