GWAS664937_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS664937_H (self reported educational attainment QTL GWAS664937 (human)) Homo sapiens

Symbol: GWAS664937_H
Name: self reported educational attainment QTL GWAS664937 (human)
RGD ID: 407015961
Trait: self reported educational attainment
LOD Score: Not Available
P Value: 1.0E-12
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382229,484,784 - 29,484,785RGD_MAPPER_PIPELINEGRCh38
GRCh372229,880,773 - 29,880,774RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS664937_HHumanself reported educational attainment  IAGPrs165633405850206 GWAS_CATALOGPMID:30038396
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
736723NEFHneurofilament heavy chain222948021829491390Human

Position Markers

Peak: (rs165633)
Human AssemblyChrPosition (strand)Source
GRCh382229,484,784 - 29,484,785RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1581529BP71_HBlood pressure QTL 71 (human)20.001Blood pressurepulse pressure221109496637094966Human
2289428BW313_HBody weight QTL 313 (human)2.090.0015Body weightBMI221134428437344284Human
407112541GWAS761517_Hself reported educational attainment QTL GWAS761517 (human)5e-12self reported educational attainment222948478429484785Human
407015961GWAS664937_Hself reported educational attainment QTL GWAS664937 (human)1e-12self reported educational attainment222948478429484785Human
407358360GWAS1007336_Heducational attainment QTL GWAS1007336 (human)2e-23educational attainment222948478429484785Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS664937_H GCST006442 Educational attainment (years of education) up to 1,131,881 European ancestry individuals A 0.7575 1E-12 12 rs165633 0.0116 self reported educational attainment (EFO:0004784)
 PMID:30038396
GWAS761517_H GCST006571 Educational attainment (MTAG) 1,311,438 European ancestry individuals A 0.7575 5E-12 11.302 rs165633 0.0106 self reported educational attainment (EFO:0004784)
 PMID:30038396
GWAS1007336_H GCST90105038 Educational attainment 3,037,499 European ancestry individuals A 0.7668 2E-23 22.699 rs165633 0.012333 educational attainment (EFO:0011015)
 PMID:35361970
Database Acc Id Source(s)
GWAS Catalog GCST006442 GWAS Catalog

RGD Curation Notes
Note Type Note Reference