GWAS631776_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS631776_H (triglyceride measurement QTL GWAS631776 (human)) Homo sapiens

Symbol: GWAS631776_H
Name: triglyceride measurement QTL GWAS631776 (human)
RGD ID: 406982800
Trait: triglyceride measurement
Measurement Type: blood triglyceride level   (CMO:0000118)    
LOD Score: Not Available
P Value: 6.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381247,983,186 - 47,983,187RGD_MAPPER_PIPELINEGRCh38
GRCh371248,376,969 - 48,376,970RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS631776_HHumanblood triglyceride level  IAGPrs11168338405850206Based on the EFO term IDGWAS_CATALOGPMID:32902719

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS631776_HHumantriglyceride measurement  IAGPrs11168338405850206 GWAS_CATALOGPMID:32902719
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
734037COL2A1collagen type II alpha 1 chain124797296748006212Human

Position Markers

Peak: (rs11168338)
Human AssemblyChrPosition (strand)Source
GRCh381247,983,186 - 47,983,187RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406982800GWAS631776_Htriglyceride measurement QTL GWAS631776 (human)0.0000006triglyceride measurementblood triglyceride level (CMO:0000118)124798318647983187Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS631776_H GCST011693 Triglyceride levels 2,732 Kuwaiti ancestry individuals ? NR 6E-7 6.222 rs11168338 5.007 triglyceride measurement (EFO:0004530)
 PMID:32902719
Database Acc Id Source(s)
GWAS Catalog GCST011693 GWAS Catalog

RGD Curation Notes
Note Type Note Reference