GWAS606655_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS606655_H (age-related hearing impairment QTL GWAS606655 (human)) Homo sapiens

Symbol: GWAS606655_H
Name: age-related hearing impairment QTL GWAS606655 (human)
RGD ID: 406957679
Trait: age-related hearing impairment
LOD Score: Not Available
P Value: 2.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382231,742,152 - 31,742,153RGD_MAPPER_PIPELINEGRCh38
GRCh372232,138,138 - 32,138,139RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS606655_HHumanPresbycusis  IAGPrs62238885405850206Based on the EFO term IDGWAS_CATALOGPMID:24939585

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS606655_HHumanage-related hearing impairment  IAGPrs62238885405850206 GWAS_CATALOGPMID:24939585

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1604500PRR14Lproline rich 14 like223168134731750132Human


Peak: (rs62238885)
Human AssemblyChrPosition (strand)Source
GRCh382231,742,152 - 31,742,153RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1581529BP71_HBlood pressure QTL 71 (human)20.001Blood pressurepulse pressure221109496637094966Human
2289428BW313_HBody weight QTL 313 (human)2.090.0015Body weightBMI221134428437344284Human
406957679GWAS606655_Hage-related hearing impairment QTL GWAS606655 (human)0.000002age-related hearing impairment223174215231742153Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS606655_H GCST002491 Age-related hearing impairment 1,489 European ancestry individuals ? NR 0.000002 5.699 rs62238885 0.1541 age-related hearing impairment (EFO:0005782)
 PMID:24939585
Database
Acc Id
Source(s)
GWAS Catalog GCST002491 GWAS Catalog

Note Type Note Reference