GWAS605365_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS605365_H (HETE measurement QTL GWAS605365 (human)) Homo sapiens

Symbol: GWAS605365_H
Name: HETE measurement QTL GWAS605365 (human)
RGD ID: 406956389
Trait: HETE measurement
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38X22,932,329 - 22,932,330RGD_MAPPER_PIPELINEGRCh38
GRCh37X22,950,446 - 22,950,447RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS605365_HHumanHETE measurement  IAGPrs150545097405850206 GWAS_CATALOGPMID:36395887
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
8552624PTCHD1-ASPTCHD1 antisense RNA (head to head)X2219300523293146Human

Position Markers

Peak: (rs150545097)
Human AssemblyChrPosition (strand)Source
GRCh38X22,932,329 - 22,932,330RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406956389GWAS605365_HHETE measurement QTL GWAS605365 (human)1e-08HETE measurementX2293232922932330Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS605365_H GCST90267427 RBC levels of 11-HETE.1 243 individuals A 0.99 1E-8 8 rs150545097 1.2 HETE measurement (EFO:0801166)
 PMID:36395887
Database Acc Id Source(s)
GWAS Catalog GCST90267427 GWAS Catalog

RGD Curation Notes
Note Type Note Reference