GWAS567530_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS567530_H (Antihypertensive use measurement QTL GWAS567530 (human)) Homo sapiens

Symbol: GWAS567530_H
Name: Antihypertensive use measurement QTL GWAS567530 (human)
RGD ID: 406918554
Trait: Antihypertensive use measurement
LOD Score: Not Available
P Value: 2.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh383111,795,760 - 111,795,761RGD_MAPPER_PIPELINEGRCh38
GRCh373111,514,607 - 111,514,608RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS567530_HHumanAntihypertensive use measurement  IAGPrs13072118405850206 GWAS_CATALOGPMID:36653479
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1350676PHLDB2pleckstrin homology like domain family B member 23111732496111976517Human
38659528LOC107984087uncharacterized LOC1079840873111783563111798595Human

Position Markers

Peak: (rs13072118)
Human AssemblyChrPosition (strand)Source
GRCh383111,795,760 - 111,795,761RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406918554GWAS567530_HAntihypertensive use measurement QTL GWAS567530 (human)2e-09Antihypertensive use measurement3111795760111795761Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS567530_H GCST90250905 Medication use for hypertension (number of purchases) 567,671 European ancestry individuals ? NR 2E-9 8.699 rs13072118 0.008695 Antihypertensive use measurement (EFO:0009927)
 PMID:36653479
Database Acc Id Source(s)
GWAS Catalog GCST90250905 GWAS Catalog

RGD Curation Notes
Note Type Note Reference