Pia33 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Pia33 (Pristane induced arthritis QTL 33) Rattus norvegicus

Symbol: Pia33
Name: Pristane induced arthritis QTL 33
RGD ID: 2302053
Previously known as: Igg2
Trait: blood immunoglobulin amount   (VT:0002460)    
Measurement Type: serum immunoglobulin G level   (CMO:0002102)    
LOD Score: 5.0
P Value: 0.001
Variance: Not Available
Inheritance Type: dominant
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.01639,315,759 - 84,315,759RGDRnor5.0
RGSC_v3.451 - 40,017,184RGDRGSC3.4
Cross Type: intercross
Strains Crossed: DA/ZtmRhd E3/ZtmRhd 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition
pristane  (IDA)

Measurement Method

Vertebrate Trait

Rat Strain
DA/ZtmRhd  (IEA)
E3/ZtmRhd  (IEA)

References

References - curated
# Reference Title Reference Citation
1. The genetic control of rheumatoid factor production in a rat model of rheumatoid arthritis. Wernhoff P, etal., Arthritis Rheum. 2003 Dec;48(12):3584-96.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D5Mgh2)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01661,815,479 - 61,816,040UniSTS
Rnor_5.0521,842,228 - 21,842,328UniSTS
RGSC_v3.4517,517,135 - 17,517,235UniSTS
RGSC_v3.41662,207,989 - 62,208,550UniSTS
RGSC_v3.4517,517,134 - 17,517,235RGD
RGSC_v3.1517,517,134 - 17,517,235RGD
Celera516,536,980 - 16,537,080UniSTS
Celera1656,475,146 - 56,475,707UniSTS
RH 3.4 Map5100.9RGD
RH 3.4 Map5100.9UniSTS
RH 2.0 Map5107.5RGD
Cytogenetic Map16q12.3UniSTS


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general measurement method: serum samples were collected on days 6, 14, 35, 49, 100, and desired levels were quantified by ELISA 2302026
qtl_general inducing agent and dosage: pristane 150 microliter 2302026
qtl_general gender: males 2302026
qtl_general software used: Map Manager QTX software and R/qtl in R-Plus package 2302026