PMC20217P1 Marker Search Result - Rat Genome Database

Advanced Search (OLGA)

Symbol:

PMC20217P1

Previously known as:

RGD ID:

5087474

Expected Size:

145 (bp)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	184,782,049 - 184,782,194 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	200,627,782 - 200,627,926	NCBI	Rnor6.0
Rnor_5.0	1	207,663,592 - 207,663,736	UniSTS	Rnor5.0
RGSC_v3.4	1	189,520,147 - 189,520,291	UniSTS	RGSC3.4
Celera	1	182,399,215 - 182,399,359	UniSTS
Cytogenetic Map	1	q37	UniSTS

Is Marker For:

Genes: Fgfr2

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


RefSeq Transcripts	NM_001109892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001109894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001109896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF147757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF294650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF456422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ312745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L19105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L19111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L19112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	25022	UniSTS

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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