RH138858 Marker Search Result - Rat Genome Database

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Marker: RH138858

Symbol: RH138858
Previously known as: AW521089; 
RGD ID: 5075894
Expected Size: 202 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr814,506,146 - 4,506,348 (+)Marker Load Pipeline
mRatBN7.212,685,816 - 2,686,018 (+)MAPPERmRatBN7.2
Rnor_6.012,350,045 - 2,350,246NCBIRnor6.0
Rnor_5.014,038,284 - 4,038,485UniSTSRnor5.0
RGSC_v3.412,884,422 - 2,884,623UniSTSRGSC3.4
Celera11,233,501 - 1,233,702UniSTS
RH 3.4 Map116.7UniSTS
Cytogenetic Map1p13UniSTS
Is Marker For: Genes:   Ust  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CCATGCGTCTGTATTCCTTGAG
Reverse Primer CAGCCGACCTCGTCTGTATTTA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1304743Usturonyl-2-sulfotransferase126669832962276Rat
11396508LOC108348767uncharacterized LOC108348767126788182693356Rat
GenBank Nucleotide CH473994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1600360Mcs16Mammary carcinoma susceptibility QTL 162.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1224439043433040Rat
2298546Neuinf4Neuroinflammation QTL 45.1nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1128736750Rat
2313090Bmd69Bone mineral density QTL 694.40.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)1132356093Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1354647Despr8Despair related QTL 80.0000341locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1124744506Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)150910843284926Rat
1578669Bss9Bone structure and strength QTL 96.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)150910843284926Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
2313070Bss52Bone structure and strength QTL 524.40.0001body length (VT:0001256)body length (CMO:0000013)1132356093Rat
2313053Bss51Bone structure and strength QTL 513.80.0001tibia length (VT:0004357)tibia length (CMO:0000450)1132356093Rat

1 to 10 of 11 rows


Database
Acc Id
Source(s)
NCBI Gene 361450 UniSTS