D15Got14 Marker Search Result - Rat Genome Database

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Marker: D15Got14

Symbol: D15Got14
Previously known as: oxsts1117; OT33.42; 
RGD ID: 45230
Expected Size: 212 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81514,316,922 - 14,317,134 (+)Marker Load Pipeline
mRatBN7.21511,886,455 - 11,886,667 (+)MAPPERmRatBN7.2
Rnor_6.01514,872,036 - 14,872,247NCBIRnor6.0
Rnor_5.01518,875,698 - 18,875,909UniSTSRnor5.0
RGSC_v3.41513,449,660 - 13,449,872RGDRGSC3.4
RGSC_v3.41513,449,661 - 13,449,872UniSTSRGSC3.4
RGSC_v3.11513,449,660 - 13,449,872RGD
Celera1511,887,272 - 11,887,483UniSTS
RH 3.4 Map1594.9RGD
RH 3.4 Map1594.9UniSTS
RH 2.0 Map1538.9RGD




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines
4. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer AACGTTTCATAGGTCACGAGG
Reverse Primer TAATTCTGCGTGACATATGACTGG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
708366Synprsynaptoporin151157337311900255Rat
41230408Oaz1-ps2ornithine decarboxylase antizyme 1, pseudogene 2151183818211895195Rat
GenBank Nucleotide AU026729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 16 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15105825014481294Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat

1 to 10 of 16 rows