A008L12 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: A008L12

Symbol: A008L12
Previously known as:
RGD ID: 2169491
Expected Size: 105 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379131,834,236 - 131,834,340UniSTSGRCh37
Build 369130,874,057 - 130,874,161RGDNCBI36
Celera9102,486,533 - 102,486,637RGD
Cytogenetic Map9q34.11UniSTS
HuRef9101,441,546 - 101,441,650UniSTS
GeneMap99-GB4 RH Map9395.69UniSTS
NCBI RH Map91167.2UniSTS
Is Marker For: Genes:   MIGA2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GTTTATTCGACTCACAGTCAGT
Reverse Primer CATTTGTGTTTGTTTACACATC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_032809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AJ420465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK074127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL592211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001617.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL300590.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976363.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 84895 UniSTS
UniSTS A008L12 UniSTS SSLP Pipeline