REN53348 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: REN53348

Symbol: REN53348
Previously known as:
RGD ID: 1964948
Expected Size: 261 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372220,420,347 - 220,420,607UniSTSGRCh37
Build 362220,128,591 - 220,128,851RGDNCBI36
Celera2214,190,309 - 214,190,569RGD
Cytogenetic Map2q35UniSTS
HuRef2212,273,376 - 212,273,636UniSTS
Is Marker For: Genes:   OBSL1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer ATGAGGTCACATAGGAAACAGAGG
Reverse Primer AGCTTGCCCAAAGCAAAACTT
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001173431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC009955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001610.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF063637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL293905.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976313.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 23363 UniSTS
UniSTS REN53348 UniSTS SSLP Pipeline