SHGC-36020 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: SHGC-36020

Symbol: SHGC-36020
Previously known as: WIAF-888; 
RGD ID: 1857693
Expected Size: 108 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371220,095,903 - 20,096,010UniSTSGRCh37
GRCh376160,200,019 - 160,200,126UniSTSGRCh37
Build 366160,120,009 - 160,120,116RGDNCBI36
Celera1225,251,034 - 25,251,141UniSTS
Celera6160,846,096 - 160,846,203RGD
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map12p12.2UniSTS
Cytogenetic Map6q25.3-q26UniSTS
HuRef1219,867,573 - 19,867,680UniSTS
HuRef6157,670,262 - 157,670,369UniSTS
GeneMap99-G3 RH Map121096.0UniSTS
Is Marker For: Genes:   TCP1   TCP1P3   ACAT2  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CAACTCAAGGTACAAGACAATTGC
Reverse Primer AACATGGAAGTTATGAAGATGCTG
 


1 to 30 of 35 rows
RefSeq Transcripts NM_001008897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_030752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC087237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL135914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV178375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001614.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001620.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G30038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 35 rows



Database
Acc Id
Source(s)
NCBI Gene 39 UniSTS
  400013 UniSTS
  6950 UniSTS