SHGC-112294 Marker Search Result - Rat Genome Database

Advanced Search (OLGA)

Symbol:

SHGC-112294

Previously known as:

RGD ID:

1750191

Expected Size:

344 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	3	79,772,352 - 79,772,695	UniSTS	GRCh37
Build 36	3	79,855,042 - 79,855,385	RGD	NCBI36
Celera	3	80,516,763 - 80,517,106	RGD
Cytogenetic Map	3	p12	UniSTS
HuRef	3	79,792,909 - 79,793,252	UniSTS
TNG Radiation Hybrid Map	3	51689.0	UniSTS

Is Marker For:

Genes: ROBO1

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


GenBank Nucleotide	AC125766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001611.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL294241.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976317.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KE135211.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	6091	UniSTS

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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