D22S1117 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: D22S1117

Symbol: D22S1117
Previously known as: GDB:583376; 
RGD ID: 1739511
Expected Size: 210 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372219,025,010 - 19,025,233UniSTSGRCh37
Build 362217,405,010 - 17,405,233RGDNCBI36
Celera222,877,036 - 2,877,259RGD
Cytogenetic Map22q11.21UniSTS
HuRef222,646,266 - 2,646,489UniSTS
Is Marker For: Genes:   DGCR2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGGCCTTTAACATTTCTGAGG
Reverse Primer CTCAGCACAGCCCAGGAT
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001173533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001173534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001184781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC000095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC002522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC004461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV177938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001630.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D79985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G26683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL305778.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976416.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L77560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L77570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X83545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X84076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 100129262 UniSTS
  9993 UniSTS