D2S1730E Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: D2S1730E

Symbol: D2S1730E
Previously known as: GDB:441072; 
RGD ID: 1734994
Expected Size: 154 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37299,226,148 - 99,226,301UniSTSGRCh37
Build 36298,592,580 - 98,592,733RGDNCBI36
Celera293,429,872 - 93,430,025RGD
Cytogenetic Map2q11.2UniSTS
HuRef292,990,736 - 92,990,889UniSTS
Is Marker For: Genes:   UNC50   COA5  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CTGTGTGTCTTGCCGCATC
Reverse Primer CAGAAGAGGAGTGTCGGTAG
 

Region

Nucleotide Sequences
GenBank Nucleotide AC010134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001610.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL296383.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976313.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 25972 UniSTS
  493753 UniSTS
UniSTS D2S1730E UniSTS SSLP Pipeline