RH92552 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH92552

Symbol: RH92552
Previously known as: stSG47282; 
RGD ID: 1679812
Expected Size: 160 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372060,710,225 - 60,710,384UniSTSGRCh37
Build 362060,143,620 - 60,143,779RGDNCBI36
Celera2057,445,400 - 57,445,559RGD
Cytogenetic Map20q13.33UniSTS
HuRef2057,487,704 - 57,487,863UniSTS
GeneMap99-GB4 RH Map20348.82UniSTS
Is Marker For: Genes:   LSM14B  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CAACAGAGGAGCCCCCTT
Reverse Primer CAGGGCATTTTGTCGAAAAT
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_144703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL078633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001628.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL308829.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976407.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 149986 UniSTS
UniSTS RH92552 UniSTS SSLP Pipeline