D11S3972 Marker Search Result - Rat Genome Database

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Advanced Search (OLGA)

Marker: D11S3972

Symbol: D11S3972
Previously known as: HSC0BC112; WI-6402; GDB:588094; 
RGD ID: 1654523
Expected Size: 236 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371149,814,181 - 49,814,416UniSTSGRCh37
GRCh37378,845,275 - 78,845,510UniSTSGRCh37
Build 36378,927,965 - 78,928,200RGDNCBI36
Celera379,589,192 - 79,589,427RGD
Celera1149,965,107 - 49,965,342UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map11p11.12UniSTS
HuRef378,864,838 - 78,865,073UniSTS
HuRef1149,531,605 - 49,531,840UniSTS
Whitehead-YAC Contig Map11 UniSTS
Is Marker For: Genes:   ROBO1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AATTTCAGGCTTTCATTAGTCTTTT
Reverse Primer GCTACCTCAAATGGTACTCATAAAG
 

Region

Nucleotide Sequences
GenBank Nucleotide AC055731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC130364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP006587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001611.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001619.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G05914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL305086.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976317.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976375.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z38428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 440040 UniSTS
  6091 UniSTS