D3Got77 Marker Search Result - Rat Genome Database

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Marker: D3Got77

Symbol: D3Got77
Previously known as: oxsts1956; OT00.14; 
RGD ID: 1630671
Expected Size: 135 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24162,271,408 - 162,271,538 (+)MAPPERmRatBN7.2
mRatBN7.24162,062,467 - 162,062,601 (-)MAPPERmRatBN7.2
Rnor_6.04162,444,005 - 162,444,138NCBIRnor6.0
Rnor_6.04162,399,096 - 162,399,225NCBIRnor6.0
Rnor_5.04227,643,117 - 227,643,250UniSTSRnor5.0
Rnor_5.04227,599,171 - 227,599,300UniSTSRnor5.0
RGSC_v3.44165,813,461 - 165,813,594UniSTSRGSC3.4
RGSC_v3.44166,040,974 - 166,041,103UniSTSRGSC3.4
Celera4150,969,749 - 150,969,878UniSTS
Celera4150,763,180 - 150,763,314UniSTS
Cytogenetic Map4q42UniSTS
Is Marker For: Genes:   Clec2d2   Clec2dl1  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GCATATAACAAATTGTATGTTTCA
Reverse Primer GATCATCTTATAGCCACAAC
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1562831Clec2d2C-type lectin domain family 2 member D24162059007162071088Rat
6484980LOC100912974uncharacterized LOC1009129744162066864162085023Rat
1588731Clec2d2l1C-type lectin domain family 2 member D2 like 14162099067162107301Rat
1588718Clec2d2l2C-type lectin domain family 2 member D2 like 24162150431162166457Rat
620070Clec2dC-type lectin domain family 2, member D4162216052162239530Rat
7696800Ppp2r5al1protein phosphatase 2, regulatory subunit B', alpha like 14162232814162235046Rat
7635298LOC102549299uncharacterized LOC1025492994162261234162272138Rat
1588698Clec2dl1C-type lectin domain family 2 member D-like 14162263635162274882Rat
GenBank Nucleotide AU029189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH614824.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH614825.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 35 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat

1 to 10 of 35 rows


Database
Acc Id
Source(s)
NCBI Gene 362445 UniSTS
  689790 UniSTS