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Gene: Slc2a6 (solute carrier family 2 member 6) Rattus norvegicus

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Symbol:

Slc2a6

Name:

solute carrier family 2 member 6

RGD ID:

1309317

Description:

Predicted to be involved in regulation of glycolytic process. Predicted to be located in lysosomal membrane. Orthologous to human SLC2A6 (solute carrier family 2 member 6); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC296600; solute carrier family 2 (facilitated glucose transporter), member 6; solute carrier family 2, facilitated glucose transporter member 6

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC2A6 (solute carrier family 2 member 6)	HGNC	Ensembl, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Slc2a6 (solute carrier family 2 (facilitated glucose transporter), member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc2a6 (solute carrier family 2 member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC2A6 (solute carrier family 2 member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC2A6 (solute carrier family 2 member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc2a6 (solute carrier family 2 member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC2A6 (solute carrier family 2 member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC2A6 (solute carrier family 2 member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc2a6 (solute carrier family 2 member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SLC2A6 (solute carrier family 2 member 6)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc2a6 (solute carrier family 2 (facilitated glucose transporter), member 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc2a6 (solute carrier family 2 member 6)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG1208	Alliance	DIOPT (Ensembl Compara\|PhylomeDB)
Drosophila melanogaster (fruit fly):	CG14606	Alliance	DIOPT (Ensembl Compara\|OMA)
Drosophila melanogaster (fruit fly):	CG15406	Alliance	DIOPT (Ensembl Compara\|OMA)
Drosophila melanogaster (fruit fly):	CG33281	Alliance	DIOPT (Ensembl Compara\|OMA)
Drosophila melanogaster (fruit fly):	CG33282	Alliance	DIOPT (Ensembl Compara\|OMA)
Drosophila melanogaster (fruit fly):	CG4607	Alliance	DIOPT (Ensembl Compara\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	slc2a6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	30,746,472 - 30,753,287 (-)	NCBI		GRCr8
mRatBN7.2	3	10,348,395 - 10,355,208 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	10,348,395 - 10,355,208 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	13,408,411 - 13,415,225 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	21,993,812 - 22,000,626 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	20,249,113 - 20,255,927 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	5,567,729 - 5,575,144 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	5,568,321 - 5,575,136 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	10,930,061 - 10,936,876 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	5,917,992 - 5,924,807 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	5,918,815 - 5,925,027 (-)	NCBI
Celera	3	5,146,427 - 5,153,242 (-)	NCBI		Celera
Cytogenetic Map	3	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a6	Rat	developmental and epileptic encephalopathy 14		ISO	SLC2A6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 14	ClinVar	PMID:28492532
Slc2a6	Rat	Ehlers-Danlos syndrome classic type 1		ISO	SLC2A6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Ehlers-Danlos syndrome and classic type	ClinVar	PMID:28492532
Slc2a6	Rat	Kleefstra syndrome 1		ISO	SLC2A6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Kleefstra syndrome 1	ClinVar	PMID:22318994 more ...
Slc2a6	Rat	Leigh disease		ISO	SLC2A6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Leigh syndrome	ClinVar	PMID:28492532
Slc2a6	Rat	primary coenzyme Q10 deficiency 7		ISO	SLC2A6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndrome	ClinVar	PMID:28492532
Slc2a6	Rat	Rafiq syndrome		ISO	SLC2A6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Rafiq syndrome	ClinVar	PMID:28492532
Slc2a6	Rat	tuberous sclerosis 1		ISO	SLC2A6 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Tuberous sclerosis 1	ClinVar	PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a6	Rat	(-)-epigallocatechin 3-gallate	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	epigallocatechin gallate results in increased expression of SLC2A6 mRNA	CTD	PMID:32512070
Slc2a6	Rat	1,2-dichloroethane	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	ethylene dichloride results in increased expression of SLC2A6 mRNA	CTD	PMID:28960355
Slc2a6	Rat	1,2-dimethylhydrazine	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of SLC2A6 mRNA	CTD	PMID:22206623
Slc2a6	Rat	17beta-estradiol	multiple interactions	ISO	SLC2A6 (Homo sapiens)	6480464	[Estradiol co-treated with TGFB1 protein] results in increased expression of SLC2A6 mRNA	CTD	PMID:30165855
Slc2a6	Rat	17beta-estradiol	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SLC2A6 mRNA	CTD	PMID:32741896
Slc2a6	Rat	17beta-estradiol 3-benzoate	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SLC2A6 mRNA	CTD	PMID:32741896
Slc2a6	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of SLC2A6 mRNA	CTD	PMID:22298810
Slc2a6	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of SLC2A6 mRNA	CTD	PMID:33387578
Slc2a6	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	Tetrachlorodibenzodioxin results in increased expression of SLC2A6 mRNA	CTD	PMID:19933214 and PMID:26290441
Slc2a6	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Slc2a6 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of SLC2A6 mRNA	CTD	PMID:21570461 and PMID:26377647
Slc2a6	Rat	2-amino-2-deoxy-D-glucopyranose	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	Glucosamine results in decreased expression of SLC2A6 mRNA	CTD	PMID:17178593
Slc2a6	Rat	2-palmitoylglycerol	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	2-palmitoylglycerol results in increased expression of SLC2A6 mRNA	CTD	PMID:37199045
Slc2a6	Rat	4,4'-sulfonyldiphenol	increases methylation	ISO	Slc2a6 (Mus musculus)	6480464	bisphenol S results in increased methylation of SLC2A6 exon	CTD	PMID:33297965
Slc2a6	Rat	acetamide	increases expression	EXP		6480464	acetamide results in increased expression of SLC2A6 mRNA	CTD	PMID:31881176
Slc2a6	Rat	acrylamide	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Acrylamide results in decreased expression of SLC2A6 mRNA	CTD	PMID:32763439
Slc2a6	Rat	aflatoxin B1	decreases expression	EXP		6480464	Aflatoxin B1 results in decreased expression of SLC2A6 mRNA	CTD	PMID:33354967
Slc2a6	Rat	aldehydo-D-glucosamine	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	Glucosamine results in decreased expression of SLC2A6 mRNA	CTD	PMID:17178593
Slc2a6	Rat	aldehydo-D-glucose	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	Glucose results in decreased expression of SLC2A6 mRNA	CTD	PMID:17178593
Slc2a6	Rat	alpha-Zearalanol	increases expression	EXP		6480464	Zeranol results in increased expression of SLC2A6 mRNA	CTD	PMID:35163327
Slc2a6	Rat	antimycin A	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Antimycin A results in decreased expression of SLC2A6 mRNA	CTD	PMID:33512557
Slc2a6	Rat	antirheumatic drug	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Antirheumatic Agents results in decreased expression of SLC2A6 mRNA	CTD	PMID:24449571
Slc2a6	Rat	aristolochic acid A	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	aristolochic acid I results in decreased expression of SLC2A6 mRNA	CTD	PMID:33212167
Slc2a6	Rat	atrazine	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Atrazine results in decreased expression of SLC2A6 mRNA	CTD	PMID:22378314
Slc2a6	Rat	benzene	affects expression	ISO	SLC2A6 (Homo sapiens)	6480464	Benzene affects the expression of SLC2A6 mRNA	CTD	PMID:21147609
Slc2a6	Rat	benzo[a]pyrene	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[Benzo(a)pyrene co-treated with benz(a)anthracene co-treated with benzo(b)fluoranthene co-treated with chrysene] results in increased expression of SLC2A6 mRNA	CTD	PMID:27858113
Slc2a6	Rat	benzo[b]fluoranthene	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	benzo(b)fluoranthene results in increased expression of SLC2A6 mRNA	CTD	PMID:26377693
Slc2a6	Rat	benzo[b]fluoranthene	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[Benzo(a)pyrene co-treated with benz(a)anthracene co-treated with benzo(b)fluoranthene co-treated with chrysene] results in increased expression of SLC2A6 mRNA	CTD	PMID:27858113
Slc2a6	Rat	Benzo[k]fluoranthene	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	benzo(k)fluoranthene results in increased expression of SLC2A6 mRNA	CTD	PMID:26377693
Slc2a6	Rat	beta-D-glucosamine	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	Glucosamine results in decreased expression of SLC2A6 mRNA	CTD	PMID:17178593
Slc2a6	Rat	beta-lapachone	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	beta-lapachone results in decreased expression of SLC2A6 mRNA	CTD	PMID:38218311
Slc2a6	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of SLC2A6 mRNA	CTD	PMID:25181051
Slc2a6	Rat	buta-1,3-diene	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	1 and 3-butadiene results in decreased expression of SLC2A6 mRNA	CTD	PMID:29038090
Slc2a6	Rat	butanal	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	butyraldehyde results in increased expression of SLC2A6 mRNA	CTD	PMID:26079696
Slc2a6	Rat	caffeine	affects phosphorylation	ISO	SLC2A6 (Homo sapiens)	6480464	Caffeine affects the phosphorylation of SLC2A6 protein	CTD	PMID:35688186
Slc2a6	Rat	cannabidiol	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	Cannabidiol results in increased expression of SLC2A6 mRNA	CTD	PMID:21542829
Slc2a6	Rat	carbon nanotube	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	Nanotubes more ...	CTD	PMID:25554681
Slc2a6	Rat	choline	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of SLC2A6 gene	CTD	PMID:20938992
Slc2a6	Rat	chrysene	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[Benzo(a)pyrene co-treated with benz(a)anthracene co-treated with benzo(b)fluoranthene co-treated with chrysene] results in increased expression of SLC2A6 mRNA	CTD	PMID:27858113
Slc2a6	Rat	cisplatin	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Cisplatin results in increased expression of SLC2A6 mRNA	CTD	PMID:27594783
Slc2a6	Rat	cisplatin	multiple interactions	ISO	SLC2A6 (Homo sapiens)	6480464	[Cisplatin co-treated with jinfukang] results in increased expression of SLC2A6 mRNA	CTD	PMID:27392435
Slc2a6	Rat	cyclophosphamide	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Cyclophosphamide results in increased expression of SLC2A6 mRNA	CTD	PMID:21527772
Slc2a6	Rat	cyclosporin A	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Cyclosporine results in increased expression of SLC2A6 mRNA	CTD	PMID:20106945
Slc2a6	Rat	cyclosporin A	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Cyclosporine results in decreased expression of SLC2A6 mRNA	CTD	PMID:25562108
Slc2a6	Rat	D-glucose	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	Glucose results in decreased expression of SLC2A6 mRNA	CTD	PMID:17178593
Slc2a6	Rat	DDE	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Dichlorodiphenyl Dichloroethylene results in decreased expression of SLC2A6 mRNA	CTD	PMID:38568856
Slc2a6	Rat	deguelin	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	deguelin results in decreased expression of SLC2A6 mRNA	CTD	PMID:33512557
Slc2a6	Rat	dexamethasone	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	Dexamethasone results in decreased expression of SLC2A6 mRNA	CTD	PMID:22733784
Slc2a6	Rat	dexamethasone	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Dexamethasone results in increased expression of SLC2A6 mRNA	CTD	PMID:25047013
Slc2a6	Rat	dimethyl sulfoxide	affects expression	ISO	SLC2A6 (Homo sapiens)	6480464	Dimethyl Sulfoxide affects the expression of SLC2A6 mRNA	CTD	PMID:24834073
Slc2a6	Rat	doxorubicin	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Doxorubicin results in decreased expression of SLC2A6 mRNA	CTD	PMID:29803840
Slc2a6	Rat	ethanol	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	Ethanol results in increased expression of SLC2A6 mRNA	CTD	PMID:19167417
Slc2a6	Rat	ethanol	affects expression	ISO	Slc2a6 (Mus musculus)	6480464	Ethanol affects the expression of SLC2A6 mRNA	CTD	PMID:30319688
Slc2a6	Rat	etoposide	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Etoposide results in increased expression of SLC2A6 mRNA	CTD	PMID:21527772
Slc2a6	Rat	folic acid	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[1 more ...	CTD	PMID:20938992 and PMID:22206623
Slc2a6	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of SLC2A6 mRNA	CTD	PMID:33387578
Slc2a6	Rat	glucose	decreases expression	ISO	Slc2a6 (Mus musculus)	6480464	Glucose results in decreased expression of SLC2A6 mRNA	CTD	PMID:17178593
Slc2a6	Rat	ketamine	decreases expression	EXP		6480464	Ketamine results in decreased expression of SLC2A6 mRNA	CTD	PMID:20080153
Slc2a6	Rat	L-methionine	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of SLC2A6 gene	CTD	PMID:20938992
Slc2a6	Rat	lipopolysaccharide	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Lipopolysaccharides results in increased expression of SLC2A6 mRNA	CTD	PMID:35811015
Slc2a6	Rat	lipopolysaccharide	multiple interactions	ISO	SLC2A6 (Homo sapiens)	6480464	[S-(1 more ...	CTD	PMID:35811015
Slc2a6	Rat	methyl methanesulfonate	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Methyl Methanesulfonate results in increased expression of SLC2A6 mRNA	CTD	PMID:21527772
Slc2a6	Rat	nickel atom	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Nickel results in increased expression of SLC2A6 mRNA	CTD	PMID:25583101
Slc2a6	Rat	oxaliplatin	multiple interactions	EXP		6480464	[oxaliplatin co-treated with Topotecan] results in increased expression of SLC2A6 mRNA	CTD	PMID:25729387
Slc2a6	Rat	paracetamol	increases expression	EXP		6480464	Acetaminophen results in increased expression of SLC2A6 mRNA	CTD	PMID:33387578
Slc2a6	Rat	pentanal	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	pentanal results in increased expression of SLC2A6 mRNA	CTD	PMID:26079696
Slc2a6	Rat	picoxystrobin	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	picoxystrobin results in decreased expression of SLC2A6 mRNA	CTD	PMID:33512557
Slc2a6	Rat	pioglitazone	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[N-nitroso-tris-chloroethylurea co-treated with pioglitazone] results in increased expression of SLC2A6 mRNA	CTD	PMID:27935865
Slc2a6	Rat	propanal	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	propionaldehyde results in increased expression of SLC2A6 mRNA	CTD	PMID:26079696
Slc2a6	Rat	pyrimidifen	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	pyrimidifen results in decreased expression of SLC2A6 mRNA	CTD	PMID:33512557
Slc2a6	Rat	rotenone	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Rotenone results in decreased expression of SLC2A6 mRNA	CTD	PMID:33512557
Slc2a6	Rat	S-(1,2-dichlorovinyl)-L-cysteine	multiple interactions	ISO	SLC2A6 (Homo sapiens)	6480464	[S-(1 more ...	CTD	PMID:35811015
Slc2a6	Rat	silicon dioxide	increases expression	ISO	Slc2a6 (Mus musculus)	6480464	Silicon Dioxide results in increased expression of SLC2A6 mRNA	CTD	PMID:23221170 and PMID:29341224
Slc2a6	Rat	sunitinib	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Sunitinib results in increased expression of SLC2A6 mRNA	CTD	PMID:31533062
Slc2a6	Rat	tebufenpyrad	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	4-chloro-N-((4-(1 and 1-dimethylethyl)phenyl)methyl)-3-ethyl-1-methyl-1H-pyrazole-5-carboxamide results in decreased expression of SLC2A6 mRNA	CTD	PMID:33512557
Slc2a6	Rat	temozolomide	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Temozolomide results in increased expression of SLC2A6 mRNA	CTD	PMID:31758290
Slc2a6	Rat	testosterone	multiple interactions	EXP		6480464	[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of SLC2A6 mRNA	CTD	PMID:32741896
Slc2a6	Rat	tetraphene	multiple interactions	ISO	Slc2a6 (Mus musculus)	6480464	[Benzo(a)pyrene co-treated with benz(a)anthracene co-treated with benzo(b)fluoranthene co-treated with chrysene] results in increased expression of SLC2A6 mRNA	CTD	PMID:27858113
Slc2a6	Rat	thapsigargin	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Thapsigargin results in decreased expression of SLC2A6 mRNA	CTD	PMID:22378314
Slc2a6	Rat	thifluzamide	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	thifluzamide results in decreased expression of SLC2A6 mRNA	CTD	PMID:33512557
Slc2a6	Rat	thioacetamide	increases expression	EXP		6480464	Thioacetamide results in increased expression of SLC2A6 mRNA	CTD	PMID:23411599 and PMID:34492290
Slc2a6	Rat	topotecan	multiple interactions	EXP		6480464	[oxaliplatin co-treated with Topotecan] results in increased expression of SLC2A6 mRNA	CTD	PMID:25729387
Slc2a6	Rat	trichloroethene	increases expression	EXP		6480464	Trichloroethylene results in increased expression of SLC2A6 mRNA	CTD	PMID:33387578
Slc2a6	Rat	tunicamycin	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Tunicamycin results in decreased expression of SLC2A6 mRNA	CTD	PMID:22378314
Slc2a6	Rat	urethane	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Urethane results in decreased expression of SLC2A6 mRNA	CTD	PMID:28818685
Slc2a6	Rat	valproic acid	decreases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of SLC2A6 mRNA	CTD	PMID:29154799
Slc2a6	Rat	valproic acid	increases methylation	ISO	SLC2A6 (Homo sapiens)	6480464	Valproic Acid results in increased methylation of SLC2A6 gene	CTD	PMID:29154799
Slc2a6	Rat	valproic acid	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Valproic Acid results in increased expression of SLC2A6 mRNA	CTD	PMID:23179753
Slc2a6	Rat	zidovudine	increases expression	ISO	SLC2A6 (Homo sapiens)	6480464	Zidovudine results in increased expression of SLC2A6 mRNA	CTD	PMID:24292225

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a6	Rat	D-glucose transmembrane transport	NOT\|involved_in	ISO	SLC2A6 (Homo sapiens)	1624291	PMID:30431159	RGD	PMID:30431159
Slc2a6	Rat	regulation of glycolytic process	involved_in	ISO	Slc2a6 (Mus musculus)	1624291	PMID:30431159	RGD	PMID:30431159
Slc2a6	Rat	regulation of glycolytic process	involved_in	ISO	SLC2A6 (Homo sapiens)	1624291	PMID:30431159	RGD	PMID:30431159

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a6	Rat	lysosomal membrane	located_in	ISO	SLC2A6 (Homo sapiens)	1624291	PMID:30431159	RGD	PMID:30431159

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc2a6	Rat	D-glucose transmembrane transporter activity	NOT\|enables	ISO	SLC2A6 (Homo sapiens)	1624291	PMID:30431159	RGD	PMID:30431159
Slc2a6	Rat	protein binding	enables	ISO	SLC2A6 (Homo sapiens)	1624291	UniProtKB:Q9NUH8 and PMID:32296183	RGD	PMID:32296183

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:30431159

Slc2a6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	30,746,472 - 30,753,287 (-)	NCBI		GRCr8
mRatBN7.2	3	10,348,395 - 10,355,208 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	10,348,395 - 10,355,208 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	13,408,411 - 13,415,225 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	21,993,812 - 22,000,626 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	20,249,113 - 20,255,927 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	5,567,729 - 5,575,144 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	5,568,321 - 5,575,136 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	10,930,061 - 10,936,876 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	5,917,992 - 5,924,807 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	5,918,815 - 5,925,027 (-)	NCBI
Celera	3	5,146,427 - 5,153,242 (-)	NCBI		Celera
Cytogenetic Map	3	p12	NCBI

SLC2A6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	133,471,094 - 133,479,099 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	133,471,094 - 133,479,127 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	136,336,216 - 136,344,221 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	135,326,038 - 135,334,039 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	133,365,773 - 133,373,772	NCBI
Celera	9	106,886,840 - 106,894,900 (-)	NCBI		Celera
Cytogenetic Map	9	q34.2	NCBI
HuRef	9	105,837,905 - 105,845,965 (-)	NCBI		HuRef
CHM1_1	9	136,486,719 - 136,494,779 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	145,685,501 - 145,693,506 (-)	NCBI		T2T-CHM13v2.0

Slc2a6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	26,911,375 - 26,918,011 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	26,911,375 - 26,918,010 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	27,021,363 - 27,028,000 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	27,021,363 - 27,027,998 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	26,876,885 - 26,883,518 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	26,843,377 - 26,849,999 (-)	NCBI		MGSCv36	mm8
Celera	2	26,724,006 - 26,730,639 (-)	NCBI		Celera
Cytogenetic Map	2	A3	NCBI
cM Map	2	19.18	NCBI

Slc2a6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	2,796,531 - 2,802,054 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	2,796,086 - 2,802,051 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC2A6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	5,873,830 - 5,887,386 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	5,876,165 - 5,890,316 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	104,589,227 - 104,602,769 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	133,205,995 - 133,214,051 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	133,205,995 - 133,214,051 (-)	Ensembl	panpan1.1		panPan2

SLC2A6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	49,878,325 - 49,885,549 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	49,878,634 - 49,885,696 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	49,159,453 - 49,166,663 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	50,752,218 - 50,759,412 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	50,752,220 - 50,759,454 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	49,514,270 - 49,521,477 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	49,856,019 - 49,863,218 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	49,934,179 - 49,941,399 (-)	NCBI		UU_Cfam_GSD_1.0

Slc2a6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	199,936,195 - 199,942,864 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936669	3,432,188 - 3,442,531 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936669	3,432,206 - 3,438,849 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC2A6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	273,063,270 - 273,075,391 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	273,063,261 - 273,075,455 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	307,041,084 - 307,049,223 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC2A6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	4,649,140 - 4,665,609 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	4,657,613 - 4,664,669 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666058	323,626 - 331,923 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc2a6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	1,898,427 - 1,903,445 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	1,897,960 - 1,903,484 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Slc2a6
37 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	248
Count of miRNA genes:	168
Interacting mature miRNAs:	190
Transcripts:	ENSRNOT00000008034
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358357	Srcrtb1	Stress Responsive Cort Basal QTL 1	6.36	0.002	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	8658162	27494778	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	1	36847613	Rat
2292615	Ept17	Estrogen-induced pituitary tumorigenesis QTL 17	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat
10401810	Kidm53	Kidney mass QTL 53			kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	8227194	47233430	Rat
1298526	Arunc3	Aerobic running capacity QTL 3	2.2		exercise endurance trait (VT:0002332)	maximum distance run on treadmill (CMO:0001406)	3	8227194	33703538	Rat
631545	Bp85	Blood pressure QTL 85	3.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
631679	Cm10	Cardiac mass QTL 10	7.34	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	1	31158234	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
631568	Bp92	Blood pressure QTL 92	2.2	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	39874793	Rat
70203	Gcr2	Gastric cancer resistance QTL 2	2.6		stomach morphology trait (VT:0000470)	stomach tumor susceptibility score (CMO:0002043)	3	8658162	27494778	Rat
70202	Alc19	Alcohol consumption QTL 19	2.5		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	3	1	27494778	Rat
2312664	Scl62	Serum cholesterol level QTL 62		0.05	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	1	38710544	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	pulse pressure (CMO:0000292)	3	1	33278763	Rat
1358185	Ept6	Estrogen-induced pituitary tumorigenesis QTL 6	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat
631831	Alc8	Alcohol consumption QTL 8	2.7		consumption behavior trait (VT:0002069)	calculated ethanol drink intake rate (CMO:0001615)	3	1	33230976	Rat

RH139471

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	10,348,500 - 10,348,687 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	5,568,427 - 5,568,613	NCBI	Rnor6.0
Rnor_5.0	3	10,930,167 - 10,930,353	UniSTS	Rnor5.0
RGSC_v3.4	3	5,918,098 - 5,918,284	UniSTS	RGSC3.4
Celera	3	5,146,533 - 5,146,719	UniSTS
RH 3.4 Map	3	21.9	UniSTS
Cytogenetic Map	3	p12	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001106562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001429162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC126134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000008034 ⟹ ENSRNOP00000008034

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	10,348,395 - 10,355,208 (-)	Ensembl
Rnor_6.0 Ensembl	3	5,568,321 - 5,575,136 (-)	Ensembl

RefSeq Acc Id:

NM_001106562 ⟹ NP_001100032

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	30,746,472 - 30,753,287 (-)	NCBI
mRatBN7.2	3	10,348,395 - 10,355,208 (-)	NCBI
Rnor_6.0	3	5,568,321 - 5,575,136 (-)	NCBI
Rnor_5.0	3	10,930,061 - 10,936,876 (-)	NCBI
RGSC_v3.4	3	5,917,992 - 5,924,807 (-)	RGD
Celera	3	5,146,427 - 5,153,242 (-)	RGD

Sequence:

show sequence

GGAGCTTCGCCTGCCGCTCGAGGAGCTCGGGCGGATGCTTTAGCGCTGCGGTGGAGTCCAGCTGTATCTGACCATCTGTGCTGGCCATGCAGGAGCCCCTGCTAAGAGCCGAGGGACTGGACTATGAC
ACCTTCCCCGAGGCGCCCGCGTCGCCTGAAGAGAAGGCACGGGCCGGGGCCTTGCAAAACAGAAGGGTGTTCCTGGCCACCTTCGCTGCCGTGCTGGGCAATTTCAGCTTTGGGTATGCCCTGGTCTA
CACATCTCCAGTCATCCCTGCGCTGAAGCGCTCTTCTGACCCAGCACTACGCCTGGACAAAATCCAGGCATCCTGGTTTGGGTCCGTGTTCACCCTGGGTGCCGCCGCTGGGGGCCTCAGTGCTATGC
TACTCAATGACCTCTTGGGCCGGAAGCTCAGCATCATGTTTTCCGCTGTCCCCTCGGCCATTGGCTATGCACTCATGGCTGGTGCCCGTGGCCTCTGGATGCTTCTGCTGGGGAGGATGCTGACAGGC
TTTGCCGGGGGACTCACTGCTGCCTGCATCCCGGTGTACGTGTCTGAGATTGCACCCCCGGGTGTTCGCGGGGCCCTGGGGGCCACGCCGCAGCTCATGGCCGTGTTTGGATCCCTGTCTCTCTATGC
CCTTGGCAAGTCTTCTGCTGCCTTGGCGATGGCTTGCCGTGGCCGGGGAGGGGCCTGTTCTGGTCATGATCCTGCTGCTTAGCTTCATGCCCAACTCGCCTCGCTTCCTACTGTCTAAGAGCCGGGAT
GAGGAAGCACTGCAGGCGCTGATCTGGCTGCGAGCGGACTCTGAGGTCCACTGGGAGTTTGAGCAGATCCAGGACAACGTGCGGAGACAGAGTAGCCGAGTGTCGTGGGCGGAGGCCTGGGAGCCCCG
TGTGTACCGGCCTATTCTCATTACAGTGCTGATGCGTTTTCTGCAGCAGCTGACAGGCATCACTCCCATCCTCGTGTACCTACAGACCATCTTCGACAGCACGTCCGTGGTGCTGCCCTCCCAGCAGG
ATGCAGCTATAGTTGGTGCTGTGAGGCTCCTGTCTGTGCTGATTGCCGCTGTCACCATGGACCTGGCCGGCCGGAAAGTCCTGCTCTATGTGTCAGCATCCATTATGTTTGTCGCCAACCTGACGCTG
GGGCTGTATGTCCAGCTTGTGCCAAGGACTCTGACCCCCAACAGCACTGTGGAGATCGTGACGCTTGGGGGCACGGAGCAGCCCCCAGCCGCGGCCTTCAACTATCTCACCCTGATACCCCTGCTGGC
CACCATGCTCTTCATTATGGGCTATGCCATGGGCTGGGGGCCCATCACCTGGCTCCTCATGTCTGAGGTTCTGCCCCTGCGTGCCCGTGGTGTGGCCTCAGGGCTCTGCGTGCTGGTCAGCTGGCTCA
CAGCCTTCGTCCTCACTAAGTACTTCCTGCTGGCAGTGAATGCCTTCGGCCTCCAGGTGCCTTTCTTCTTCTTCTCGGCCATCTGCCTGCTCAGCCTGCTCTTCACAGGCTGCTGTGTGCCTGAGACC
AGGGGCCGCTCGCTGGAGCAGATCGAGGCCTTCTTCCACACTCGCAGGATGTCCTTCAGGCCCTAGTCAGGGGCTTGCCTGTAAGGGGCCAGGCCATGTGGGCCAGGCCTGTGCACACCTGCAGCCGG
GAGCAGCAGCACCCCTGCCGTCAGCCACTGCACACTTCCACCTCGGACAGGCAGTTCACCAACTGTGGGCTGGTGGGCCCCAGCAGGCAGCCCGCAGTGCTGTAATACCTCAGCTGAGATCCGCAGGG
GGGCAGGCAGCCCTGCCCCAGACTGAGCAAAGGCTGTACCCAAGAACAATGCTGTTGGGACCTCCGGTCTAGTTCCTCATTCCTACAAGGAACACTTCCCATGTAGGGCCATGTTGAGGACAGAAAAC
AGGGATGGAGGTGGCAATGTGGCATTGTACAAGGACATTGTCACTTCCTTCTGATCAACTGGCCAGGGGGAGGACAGGGTCCTGTACCCTCAAGGGTCTGGGTACCTTGGGGAGCACTGGACCCAGTC
CAACCTTGGATACCTCTAGTCTACAGACTGTTCACTGTTTTTCAAAATAAAGGAGCTGGGCCTACAGCCTCTGGGAGG

hide sequence

RefSeq Acc Id:

XM_063283472 ⟹ XP_063139542

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	30,746,484 - 30,753,282 (-)	NCBI

RefSeq Acc Id:

XM_063283473 ⟹ XP_063139543

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	30,746,484 - 30,753,286 (-)	NCBI

RefSeq Acc Id:

XM_063283474 ⟹ XP_063139544

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	30,746,484 - 30,753,282 (-)	NCBI

RefSeq Acc Id:

XM_063283475 ⟹ XP_063139545

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	30,746,484 - 30,753,282 (-)	NCBI

RefSeq Acc Id:

XM_063283476 ⟹ XP_063139546

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	30,746,484 - 30,753,261 (-)	NCBI


Protein RefSeqs	NP_001100032	(Get FASTA)	NCBI Sequence Viewer
	NP_001416089	(Get FASTA)	NCBI Sequence Viewer
	NP_001416090	(Get FASTA)	NCBI Sequence Viewer
	NP_001416091	(Get FASTA)	NCBI Sequence Viewer
	XP_063139542	(Get FASTA)	NCBI Sequence Viewer
	XP_063139543	(Get FASTA)	NCBI Sequence Viewer
	XP_063139544	(Get FASTA)	NCBI Sequence Viewer
	XP_063139545	(Get FASTA)	NCBI Sequence Viewer
	XP_063139546	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL93446	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000008034.6

RefSeq Acc Id:

NP_001100032 ⟸ NM_001106562

- Sequence:

show sequence

MPLASLLLPWRWLAVAGEGPVLVMILLLSFMPNSPRFLLSKSRDEEALQALIWLRADSEVHWEFEQIQDNVRRQSSRVSWAEAWEPRVYRPILITVLMRFLQQLTGITPILVYLQTIFDSTSVVLPSQ
QDAAIVGAVRLLSVLIAAVTMDLAGRKVLLYVSASIMFVANLTLGLYVQLVPRTLTPNSTVEIVTLGGTEQPPAAAFNYLTLIPLLATMLFIMGYAMGWGPITWLLMSEVLPLRARGVASGLCVLVSW
LTAFVLTKYFLLAVNAFGLQVPFFFFSAICLLSLLFTGCCVPETRGRSLEQIEAFFHTRRMSFRP

hide sequence

Ensembl Acc Id:

ENSRNOP00000008034 ⟸ ENSRNOT00000008034

RefSeq Acc Id:	XP_063139543 ⟸ XM_063283473
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063139545 ⟸ XM_063283475
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063139544 ⟸ XM_063283474
- Peptide Label:	isoform X3

Protein Domains

Major facilitator superfamily (MFS) profile

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZLC4-F1-model_v2	AlphaFold	D3ZLC4	1-321	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-50309	BioCyc
Ensembl Genes	ENSRNOG00000005900	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000008034.7	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1250.20	UniProtKB/TrEMBL
InterPro	Major_facilitator_SF	UniProtKB/TrEMBL
	MFS_trans_sf	UniProtKB/TrEMBL
	MFS_Trehalose_Transporter	UniProtKB/TrEMBL
	Sub_transporter	UniProtKB/TrEMBL
	Sugar/inositol_transpt	UniProtKB/TrEMBL
	Sugar_transporter_CS	UniProtKB/TrEMBL
KEGG Report	rno:296600	UniProtKB/TrEMBL
NCBI Gene	296600	ENTREZGENE
PANTHER	PTHR48021	UniProtKB/TrEMBL
	SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER MEMBER 6	UniProtKB/TrEMBL
Pfam	Sugar_tr	UniProtKB/TrEMBL
PhenoGen	Slc2a6	PhenoGen
PRINTS	SUGRTRNSPORT	UniProtKB/TrEMBL
PROSITE	MFS	UniProtKB/TrEMBL
	SUGAR_TRANSPORT_1	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000005900	RatGTEx
Superfamily-SCOP	MFS_gen_substrate_transporter	UniProtKB/TrEMBL
UniProt	A6JTK1_RAT	UniProtKB/TrEMBL
	D3ZLC4_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc2a6	solute carrier family 2 member 6	Slc2a6	solute carrier family 2 (facilitated glucose transporter), member 6	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Slc2a6	solute carrier family 2 (facilitated glucose transporter), member 6	Slc2a6_predicted	solute carrier family 2 (facilitated glucose transporter), member 6 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Slc2a6_predicted	solute carrier family 2 (facilitated glucose transporter), member 6 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar