Gm15928 (predicted gene 15928) - Rat Genome Database

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Gene: Gm15928 (predicted gene 15928) Mus musculus
Analyze
Symbol: Gm15928
Name: predicted gene 15928
RGD ID: 9679529
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3973,996,099 - 3,997,505 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl73,996,238 - 3,996,517 (-)EnsemblGRCm39 Ensembl
GRCm3873,993,100 - 3,994,506 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl73,993,239 - 3,993,518 (-)EnsemblGRCm38mm10GRCm38
Celera73,744,503 - 3,745,909 (-)NCBICelera
Cytogenetic Map7A1NCBI
cM Map72.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm15928
97 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:112
Count of miRNA genes:109
Interacting mature miRNAs:112
Transcripts:ENSMUST00000122455
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
25394570Skmw58_mskeletal muscle weight 58, TA (mouse)735524286281481Mouse
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000122455
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl73,996,238 - 3,996,517 (-)Ensembl
GRCm38.p6 Ensembl73,993,239 - 3,993,518 (-)Ensembl
RefSeq Acc Id: XR_391124
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3873,993,100 - 3,994,506 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000082093 Ensembl
MGD MGI:3802091 ENTREZGENE
NCBI Gene Gm15928 ENTREZGENE
PhenoGen Gm15928 PhenoGen