Skmw58_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Skmw58_m (skeletal muscle weight 58, TA (mouse)) Mus musculus

Symbol: Skmw58_m
Name: skeletal muscle weight 58, TA (mouse)
RGD ID: 25394570
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3973,552,428 - 6,281,481MOUSEQTLGRCm39
GRCm3873,503,912 - 6,278,482MOUSEQTLGRCm38
cM Map7syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
Additional References at PubMed
PMID:31761296  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
732129Il11interleukin 11747753724785877Mouse
62344Tnni3troponin I, cardiac 3745213044526228Mouse
1320656Zfp865zinc finger protein 865750233755036225Mouse
1313127Kmt5clysine methyltransferase 5C747430914750513Mouse
1316591Rfpl4ret finger protein-like 4751127865119910Mouse
1312474Tmc4transmembrane channel-like gene family 4736687903680522Mouse
733580TfptTCF3 (E2A) fusion partner736233233632911Mouse
1550044Zfp444zinc finger protein 444761754296196103Mouse
1321496Zfp787zinc finger protein 787761344886162382Mouse
1323448Ndufa3NADH:ubiquinone oxidoreductase subunit A3736203723623162Mouse
1314654Tmem150btransmembrane protein 150B747098314728250Mouse
1318118Cdc42ep5CDC42 effector protein 5741542594167830Mouse
1318203Lilra6leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6739112763918569Mouse
1322858Ppp6r1protein phosphatase 6, regulatory subunit 1746344944661949Mouse
1558595Ube2subiquitin-conjugating enzyme E2S748110134815339Mouse
1332395Fiz1Flt3 interacting zinc finger protein 1750100555017727Mouse
1332250Epn1epsin 1750832075101178Mouse
1557709Galpgalanin-like peptide762000896219136Mouse
1557530Brsk1BR serine/threonine kinase 1746936354718996Mouse
1551854Rps9ribosomal protein S9737070353709896Mouse
1608929D630041G03RikRIKEN cDNA D630041G03 gene744702444473883Mouse
16098174933402C05RikRIKEN cDNA 4933402C05 gene760421066045554Mouse
1615502Gm5321predicted gene 5321760220006022511Mouse
1615503Vmn1r55vomeronasal 1 receptor 55751494895150421Mouse
1613962Vmn1r64vomeronasal 1 receptor 64758865795887541Mouse
1613963Vmn1r59vomeronasal 1 receptor 59754568265457758Mouse
1610968Ptprhprotein tyrosine phosphatase receptor type H745516074607040Mouse
1319193Isoc2bisochorismatase domain containing 2b748479584869178Mouse
1615112Eps8l1EPS8-like 1744636364483486Mouse
16109021700095K22RikRIKEN cDNA 1700095K22 gene739841093985878Mouse
16107139430041J12RikRIKEN cDNA 9430041J12 gene740771244123727Mouse
1616241Zfp784zinc finger protein 784750374455041445Mouse
1616249Vmn1r60vomeronasal 1 receptor 60755471965548098Mouse
1616216Vmn2r28vomeronasal 2, receptor 28754834555496850Mouse
1312702Rdh13retinol dehydrogenase 13 (all-trans and 9-cis)744286644474279Mouse
1613833Eddm13epididymal protein 13762556366284860Mouse
1613910Atp6v0c-ps1ATPase, H+ transporting, lysosomal V0 subunit C, pseudogene 1744153224416442Mouse
1614440Rasl2-9RAS-like, family 2, locus 9751279415128949Mouse
734030Hspbp1HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1746635144688218Mouse
733052Tnnt1troponin T1, skeletal, slow745075684518974Mouse
1551274Mboat7membrane bound O-acyltransferase domain containing 7736807883696188Mouse
1619173Tmem86btransmembrane protein 86B746310394634211Mouse
1552929Leng9leukocyte receptor cluster (LRC) member 9741511824152871Mouse
1616398Sbk2SH3-binding domain kinase family, member 2749591334967405Mouse
1616399Sbk3SH3 domain binding kinase family, member 3749682464995756Mouse
1618010Gm5052predicted gene 5052760256606026167Mouse
1618011Ssc5dscavenger receptor cysteine rich family, 5 domains749288204947827Mouse
1618012Nat14N-acetyltransferase 14749252504928005Mouse
1552975Zfp579zinc finger protein 579749958514999100Mouse
1317416Leng1leukocyte receptor cluster (LRC) member 1736631063668839Mouse
1552791Tsen34tRNA splicing endonuclease subunit 34736963003704033Mouse
1617579Lair1leukocyte-associated Ig-like receptor 1740100724076566Mouse
1617003Vmn1r57vomeronasal 1 receptor 57752234775224409Mouse
1556997Zfp524zinc finger protein 524750181425021487Mouse
1618835Lgalsl2galectin like 2753535415363681Mouse
1618567Tmem238transmembrane protein 238747877844792559Mouse
1618561Isoc2aisochorismatase domain containing 2a748800524898716Mouse
1618115Garin5bgolgi associated RAB2 interactor family member 5B747562254774362Mouse
1618116Gp6glycoprotein 6 platelet743658524400849Mouse
1620100Pirbpaired Ig-like receptor B737155043723381Mouse
1317898Pira2paired-Ig-like receptor A2738398073848102Mouse
1550721Cox6b2cytochrome c oxidase subunit 6B2747547914756093Mouse
733962Rpl28ribosomal protein L28747959644797546Mouse
1320817Ttyh1tweety family member 1741224184139206Mouse
1620104Pira1paired-Ig-like receptor A1737346253742957Mouse
1617051Gm7025predicted gene 7025754631185466499Mouse
1619616Dnaaf3dynein, axonemal assembly factor 3745259324535487Mouse
1557387Zscan5bzinc finger and SCAN domain containing 5B762252776242416Mouse
1552306Prpf31pre-mRNA processing factor 31736329843645484Mouse
1621432Nlrp4cNLR family, pyrin domain containing 4C760481606108148Mouse
1621068Gm6855predicted gene 6855746415164642368Mouse
1620700Vmn1r63vomeronasal 1 receptor 63758053445829228Mouse
1620701Vmn1r62vomeronasal 1 receptor 62756776035679598Mouse
1620702Vmn1r56vomeronasal 1 receptor 56751979155199746Mouse
1620703Vmn1r58vomeronasal 1 receptor 58754118865416144Mouse
1553113Vmn1r65vomeronasal 1 receptor 65760107496014009Mouse
1314653Leng8leukocyte receptor cluster (LRC) member 8741400144151176Mouse
1312408Cnot3CCR4-NOT transcription complex, subunit 3736467173664108Mouse
1556936Oscarosteoclast associated receptor736128123619156Mouse
736312Syt5synaptotagmin V745427644550540Mouse
733815Ncr1natural cytotoxicity triggering receptor 1743407144348183Mouse
1315768Zfp580zinc finger protein 580750416825056722Mouse
1623887Tmem190transmembrane protein 190747847884787340Mouse
1321741U2af2U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2750638845082937Mouse
1624576D030047H15RikRIKEN cDNA D030047H15 gene741293394139925Mouse
1622951Nlrp2NLR family, pyrin domain containing 2753015465354034Mouse
1622952Ccdc106coiled-coil domain containing 106750568705063784Mouse
1622953Zfp628zinc finger protein 628749182214925001Mouse
1622954Shisa7shisa family member 7748285514847788Mouse
1622955Ppp1r12cprotein phosphatase 1, regulatory subunit 12C744845184506762Mouse
1622956Lilra5leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5742406434246689Mouse
2295983Gm7363predicted gene 7363739867233987210Mouse
2295592Gm5319predicted gene 5319741770074180208Mouse
2294235Pira13paired-Ig-like receptor A13738196963828759Mouse
2309000Gm9463predicted gene 9463746145294615315Mouse
2301783Pira2-ps2paired-Ig-like receptor A2, pseudogene 2737584773767107Mouse
2306866Vmn1r61vomeronasal 1 receptor 61756134105614312Mouse
2310607Gm5320predicted gene 5320749119424913686Mouse
2309971Gm9591predicted gene 9591756745685675000Mouse
2310968Vmn1r-ps46vomeronasal 1 receptor, pseudogene 46759692695970218Mouse
2310973Vmn1r-ps43vomeronasal 1 receptor, pseudogene 43757712545772324Mouse
2310978Gm3440predicted gene 3440756958175697718Mouse
2314277Pira12paired-Ig-like receptor A12738872003901158Mouse
4840614Vmn1r-ps41vomeronasal 1 receptor, pseudogene 41756576915658636Mouse
4885298Vmn1r-ps45vomeronasal 1 receptor, pseudogene 45759325015933418Mouse
3753471Vmn1r-ps39vomeronasal 1 receptor, pseudogene 39754309235431274Mouse
3753470Vmn1r-ps40vomeronasal 1 receptor, pseudogene 40755757285576107Mouse
5142578Gm18973predicted gene, 18973746154134616166Mouse
5142799Gm18758predicted gene, 18758761197236127730Mouse
5142803Gm18757predicted gene, 18757753079375311133Mouse
5134319Mir3572microRNA 3572736589613659046Mouse
5146751Pira2-ps1paired-Ig-like receptor A2, pseudogene 1737892843802619Mouse
5553095Vmn1r-ps44vomeronasal 1 receptor, pseudogene 44758286435829176Mouse
6892902Gm10693predicted pseudogene 10693738636223872263Mouse
9590986Gm15510predicted gene 15510750499465060115Mouse
9610361Gm36210predicted gene, 36210748999454910716Mouse
9600000Gm15927predicted gene 15927736340703648500Mouse
9679529Gm15928predicted gene 15928739960993997505Mouse
9665929Gm36127predicted gene, 36127748400914847984Mouse
9640877Gm36371predicted gene, 36371761601806166583Mouse
10018770Gm42369predicted gene, 42369747419894743033Mouse
10011387Gm38420predicted gene, 38420760417516042302Mouse
11576787Gm47692predicted gene, 47692751307855132418Mouse
13513380Gm15931predicted gene 15931742771324285927Mouse
14996798Gm23942predicted gene, 23942752803435280449Mouse
15017934Mir12202microRNA 12202749209644921029Mouse
15001976Gm24537predicted gene, 24537747418314741932Mouse
14997722Gm23741predicted gene, 23741741048894105060Mouse
39131021Gm53351predicted gene, 53351749991714999529Mouse
39128584Gm53350predicted gene, 53350748680144874784Mouse
39129846Gm57780predicted gene, 57780747963394801206Mouse
163688533LOC128925602CapStarr-seq enhancer MGSCv37_chr7:4817662-4817771748690594869406Mouse
163681839LOC128925600CapStarr-seq enhancer MGSCv37_chr7:4461475-4461662745128724513059Mouse
163658474LOC128925603STARR-seq mESC enhancer starr_17950750169845019017Mouse
163647861LOC128925599STARR-positive B cell enhancer ABC_E2811736327603633061Mouse
163666828LOC128925598CapStarr-seq enhancer MGSCv37_chr7:3581200-3581309736325973632706Mouse
163673085LOC128925601CapStarr-seq enhancer MGSCv37_chr7:4605526-4605679746569234657076Mouse
163711045LOC128925604STARR-positive B cell enhancer ABC_E4893761752796175580Mouse
401703385LOC131372736STARR-seq mESC enhancer starr_17910735816923583982Mouse
401700949LOC131372747STARR-seq mESC enhancer starr_17924742631504264743Mouse
401700769LOC131372757STARR-seq mESC enhancer starr_17954754626045463627Mouse
401701864LOC131372743STARR-seq mESC enhancer starr_17920741573684159216Mouse
401703023LOC131372758STARR-seq mESC enhancer starr_17955755300385531547Mouse
401700840LOC131372740STARR-seq mESC enhancer starr_17916740059244008186Mouse
401700722LOC131372768STARR-seq mESC enhancer starr_17966762064416208185Mouse
401703323LOC131372751STARR-seq mESC enhancer starr_17929743483354349570Mouse
401701452LOC131372764STARR-seq mESC enhancer starr_17961759015135903791Mouse
401715229LOC131372737STARR-seq mESC enhancer starr_17911735887083590758Mouse
401715306LOC131372738STARR-seq mESC enhancer starr_17914736473463649268Mouse
401715124LOC131372749STARR-seq mESC enhancer starr_17927743131874314896Mouse
401713113LOC131372744STARR-seq mESC enhancer starr_17921741955354196976Mouse
401713139LOC131372762STARR-seq mESC enhancer starr_17959756555635656856Mouse
401709892LOC131372753STARR-seq mESC enhancer starr_17937747541014756598Mouse
401710085LOC131372766STARR-seq mESC enhancer starr_17963759837905986532Mouse
401711432LOC131372761STARR-seq mESC enhancer starr_17958756182155619643Mouse
401710120LOC131372750STARR-seq mESC enhancer starr_17928743156254316732Mouse
401709788LOC131372745STARR-seq mESC enhancer starr_17922742157004217043Mouse
401711314LOC131372763STARR-seq mESC enhancer starr_17960758622715864262Mouse
401709801LOC131372746STARR-seq mESC enhancer starr_17923742520134255325Mouse
401711583LOC131372759STARR-seq mESC enhancer starr_17956755428615544836Mouse
401711773LOC131372756STARR-seq mESC enhancer starr_17953754436455445140Mouse
401710833LOC131372760STARR-seq mESC enhancer starr_17957755622405562994Mouse
401710838LOC131372752STARR-seq mESC enhancer starr_17930743516494354376Mouse
401711415LOC131372739STARR-seq mESC enhancer starr_17915739844513986703Mouse
401707391LOC131372767STARR-seq mESC enhancer starr_17964760088856011745Mouse
401709544LOC131372748STARR-seq mESC enhancer starr_17925742913194292268Mouse
401708969LOC131372769STARR-seq mESC enhancer starr_17972762608466262760Mouse
401707698LOC131372741STARR-seq mESC enhancer starr_17917740630824065599Mouse
401706934LOC131372735STARR-seq mESC enhancer starr_17909735755783578145Mouse
401706097LOC131372754STARR-seq mESC enhancer starr_17941748233474824898Mouse
401705528LOC131372742STARR-seq mESC enhancer starr_17919741266384129075Mouse
401706315LOC131372755STARR-seq mESC enhancer starr_17947749049654906249Mouse
401704978LOC131372734STARR-seq mESC enhancer starr_17908735727613574551Mouse
401716351LOC131372765STARR-seq mESC enhancer starr_17962759240015925674Mouse
401834113LOC132411871STARR-positive B cell enhancer ABC_E9020750649915065291Mouse
401833626LOC132411869STARR-positive B cell enhancer ABC_E4890750503775050678Mouse
401833131LOC132411854STARR-positive B cell enhancer mm9_chr7:3672088-3672388737234853723785Mouse
401832465LOC132411859STARR-positive B cell enhancer ABC_E3695746619664662267Mouse
401833491LOC132411852STARR-positive B cell enhancer ABC_E1077736684513668752Mouse
401834254LOC132411864STARR-positive B cell enhancer ABC_E2220748798044880105Mouse
401834609LOC132411866STARR-positive B cell enhancer ABC_E6508749461534946454Mouse
401835910LOC132411858STARR-positive B cell enhancer ABC_E9682744485414448841Mouse
401836072LOC132411853STARR-positive B cell enhancer ABC_E2812737069573707258Mouse
401837149LOC132411860STARR-positive B cell enhancer ABC_E2219746880184688319Mouse
401836627LOC132411872STARR-positive B cell enhancer ABC_E4891750654085065709Mouse
401835792LOC132411870STARR-positive B cell enhancer ABC_E3697750644945064795Mouse
401837023LOC132411863STARR-positive B cell enhancer ABC_E441748157564816057Mouse
401837495LOC132411861STARR-positive B cell enhancer ABC_E127747428064743107Mouse
401836353LOC132411868STARR-positive B cell enhancer ABC_E3696750411845041485Mouse
401835503LOC132411855STARR-positive B cell enhancer mm9_chr7:3796869-3797170738482663848567Mouse
401838316LOC132411856STARR-positive B cell enhancer ABC_E8149741530274153328Mouse
401838892LOC132411874STARR-positive B cell enhancer ABC_E9284761590986159398Mouse
401840143LOC132411867STARR-positive B cell enhancer ABC_E4889750231915023492Mouse
401839815LOC132411873STARR-positive B cell enhancer ABC_E4892751042885104589Mouse
401839479LOC132411857STARR-positive B cell enhancer ABC_E1718744303034430604Mouse
401841596LOC132411862STARR-positive B cell enhancer ABC_E6507747956144795915Mouse
401841939LOC132411865STARR-positive B cell enhancer ABC_E10424749182844918584Mouse
4797316Vmn1r-ps42vomeronasal 1 receptor, pseudogene 42757310105731610Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301177Vent3_mventricular size 3 (mouse)Not determined7120511925Mouse
10054067Sle20_msystematic lupus erythematosus susceptibility 20 (mouse)Not determined7120511925Mouse
1302188Lxw6_mlupus BXSB x NZW 6 (mouse)Not determined7121698146Mouse
12904941Edlmmq6_mextensor digitorum longus muscle mass QTL 6 (mouse)7121821047Mouse
12904948Tammq5_mtibialis anterior muscle mass QTL 5 (mouse)7121821047Mouse
12904953Gmmq5_mgastrocnemius muscle mass QTL 5 (mouse)7121821047Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1302115Abhr3_mallergen-induced bronchial hyperresponsiveness 3 (mouse)Not determined7331599616637423Mouse
1301115Lrdm1_mlymphoproliferation (Fas) renal disease modifier 1 (mouse)Not determined7335204824879418Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25394570Skmw58_mskeletal muscle weight 58, TA (mouse)735524286281481Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25394569Skmw57_mskeletal muscle weight 57, gastroc (mouse)7458046916687861Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:6259854 MouseQtl