Gm30906 (predicted gene, 30906) - Rat Genome Database

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Gene: Gm30906 (predicted gene, 30906) Mus musculus
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Symbol: Gm30906
Name: predicted gene, 30906
RGD ID: 9667200
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39108,051,872 - 8,069,104 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl108,051,840 - 8,069,108 (+)EnsemblGRCm39 Ensembl
GRCm38108,176,108 - 8,193,340 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl108,176,131 - 8,193,340 (+)EnsemblGRCm38mm10GRCm38
Celera108,057,657 - 8,076,490 (+)NCBICelera
Cytogenetic Map10A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm30906
563 total Variants

1 to 10 of 18 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11532718Sluc44f_msusceptibility to lung cancer 44f (mouse)10126289265Mouse
1357813Ath20_matherosclerosis 20 (mouse)Not determined10328318537283334Mouse
11532717Sluc44g_msusceptibility to lung cancer 44g (mouse)10126289265Mouse
1300881Sluc29_msusceptibility to lung cancer 29 (mouse)Not determined10126289265Mouse
12879494Facq1_mfear acquisition QTL 1 (mouse)10131279130Mouse
1300759Geot_mgeotaxia (mouse)Not determined10126289265Mouse
1300790Pgia6_mproteoglycan induced arthritis 6 (mouse)Not determined10381017137810295Mouse
15039341Nmrs28_mNAFLD-associated magnetic resonance shift 28 (mouse)1035100134351001Mouse
11533917Mts2_mmammary tumor susceptibility 2 (mouse)10126289265Mouse
1300997Eae15_msusceptibility to experimental allergic encephalomyelitis 15 (mouse)Not determined10440815438408276Mouse

1 to 10 of 18 rows





RefSeq Transcripts XR_380102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC159466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000219578
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl108,051,840 - 8,069,108 (+)Ensembl
GRCm38.p6 Ensembl108,176,131 - 8,193,340 (+)Ensembl
Ensembl Acc Id: ENSMUST00000366729
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl108,051,995 - 8,069,101 (+)Ensembl
RefSeq Acc Id: XR_380102
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39108,051,872 - 8,069,104 (+)NCBI
GRCm38108,176,108 - 8,193,340 (+)NCBI
Sequence:
RGD ID:15093705
Promoter ID:EPDNEWNC_M1613
Type:single initiation site
Name:Gm30906_1
Description:predicted gene, 30906 [Source:MGI Symbol;Acc:MGI:5590065]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38108,176,133 - 8,176,193EPDNEWNC


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000112109 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000219578 ENTREZGENE
MGD MGI:5590065 ENTREZGENE
NCBI Gene Gm30906 ENTREZGENE
PhenoGen Gm30906 PhenoGen
RNAcentral URS0000A8C612 RNACentral